RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 ZBTB26Q9HCK0 441 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 ZNF490Q9ULM2 529 aaPredicted RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 PTRH2Q9Y3E5 179 aaKnown RBP12.84□□□□□ -0.35
RPAIN-205ENST00000536255 MAP4K5Q9Y4K4 846 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 MAU2Q9Y6X3 613 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 BOD1L1Q8NFC6 3051 aa12.84□□□□□ -0.35
RPAIN-205ENST00000536255 CFAP46Q8IYW2 2715 aa12.83□□□□□ -0.35
RPAIN-205ENST00000536255 A0A0A6YYC8 382 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 I3L1I5 382 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 FOXS1O43638 330 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 TRIM13O60858 407 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 OR1D4P47884 311 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 LCP2Q13094 533 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 IFT88Q13099 833 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 TRAF3Q13114 568 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 CPSF6Q16630 551 aaKnown RBP eCLIP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 TTC19Q6DKK2 380 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 TRIM40Q6P9F5 258 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 CHSY3Q70JA7 882 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 COX15Q7KZN9 410 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 OVCH1Q7RTY7 1134 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 RAB43Q86YS6 212 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 DTWD1Q8N5C7 304 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 GOLGA6L1Q8N7Z2 621 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 C9orf43Q8TAL5 461 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 GAL3ST3Q96A11 431 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 MOCOSQ96EN8 888 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 CMTM7Q96FZ5 175 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 FAR2Q96K12 515 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 REXO4Q9GZR2 422 aaKnown RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 SLC25A18Q9H1K4 315 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 SLC26A1Q9H2B4 701 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 C12orf65Q9H3J6 166 aaKnown RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 WDR54Q9H977 334 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 CLK4Q9HAZ1 481 aaKnown RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 TMBIM4Q9HC24 238 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 ZNF282Q9UDV7 671 aaPredicted RBP12.83□□□□□ -0.36
RPAIN-205ENST00000536255 TRPS1Q9UHF7 1281 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 RNF11Q9Y3C5 154 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 FER1L5A0AVI2 2057 aa12.83□□□□□ -0.36
RPAIN-205ENST00000536255 LRIT2A6NDA9 550 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ARGFXA6NJG6 315 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ERI3O43414 337 aaKnown RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 KLHL18O94889 574 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ZWINTO95229 277 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 UMODP07911 640 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ZNF888P0CJ79 500 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 CREB1P16220 341 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 IL1RNP18510 177 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 OTX2P32243 289 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 NAGLUP54802 743 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 PKNOX1P55347 436 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 FOXL2P58012 376 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 NFATC3Q12968 1075 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 SSPNQ14714 243 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 PCLAFQ15004 111 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ZRSR2Q15696 482 aaKnown RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 NKG7Q16617 165 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 TMEM35AQ53FP2 167 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 TOR1AIP1Q5JTV8 583 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 CPZQ66K79 652 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 GPRIN3Q6ZVF9 776 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 RPS27LQ71UM5 84 aaKnown RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 MRGPREQ86SM8 312 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 C10orf107Q8IVU9 208 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 HOMEZQ8IX15 550 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 AFAP1L2Q8N4X5 818 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 OR4F6Q8NGB9 312 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 OR9A4Q8NGU2 314 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 HUS1BQ8NHY5 278 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 UTP15Q8TED0 518 aaKnown RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ZNF473Q8WTR7 871 aaKnown RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ABHD17AQ96GS6 310 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 CDK15Q96Q40 435 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 TRMOQ9BU70 441 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 YIPF2Q9BWQ6 316 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ROGDIQ9GZN7 287 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 ELOVL6Q9H5J4 265 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 KCNK9Q9NPC2 374 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 MKKSQ9NPJ1 570 aaPredicted RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 C14orf105Q9NVL8 296 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 SLC17A7Q9P2U7 560 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 TRPC4Q9UBN4 977 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 CTSFQ9UBX1 484 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 SNX6Q9UNH7 406 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 MRPS2Q9Y399 296 aaKnown RBP12.82□□□□□ -0.36
RPAIN-205ENST00000536255 NAALAD2Q9Y3Q0 740 aa12.82□□□□□ -0.36
RPAIN-205ENST00000536255 MKRN2OSH3BPM6 223 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 SGK494L7N484 410 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 FOXE1O00358 373 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-205ENST00000536255 GALR3O60755 368 aaPredicted RBP12.81□□□□□ -0.36
RPAIN-205ENST00000536255 DNAJB5O75953 348 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 KRT6AP02538 564 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 KRT6BP04259 564 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 ENO1P06733 434 aaKnown RBP12.81□□□□□ -0.36
RPAIN-205ENST00000536255 TSPAN8P19075 237 aa12.81□□□□□ -0.36
RPAIN-205ENST00000536255 PTX3P26022 381 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms