RNA–Protein interactions for RNA: ENST00000534900.5

PTPN6-205, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 4

Gene PTPN6, Length 538 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-205	ENST00000534900	RNF11	Q9Y3C5	154 aa		13.55	□□□□□ -0.24
PTPN6-205	ENST00000534900	ATRX	P46100	2492 aa		13.55	□□□□□ -0.24
PTPN6-205	ENST00000534900	SEC16A	O15027	2179 aa		13.55	□□□□□ -0.24
PTPN6-205	ENST00000534900		A8MT66	165 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	OR7A17	O14581	309 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	ERI3	O43414	337 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	SH3BGRL	O75368	114 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	CEACAM4	O75871	244 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	TGFB1	P01137	390 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	PDGFA	P04085	211 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	GSTA1	P08263	222 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	ACPP	P15309	386 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	TAC1	P20366	129 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	PIK3CG	P48736	1102 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	PLA2G16	P53816	162 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	SKP1	P63208	163 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	RASA2	Q15283	850 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	TUBB8	Q3ZCM7	444 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	LACTB2	Q53H82	288 aa	Predicted RBP	13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	GRHL2	Q6ISB3	625 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	TCTN3	Q6NUS6	607 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	SH2D5	Q6ZV89	423 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	ASB18	Q6ZVZ8	466 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	PARP9	Q8IXQ6	854 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	GALNT16	Q8N428	558 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	RNF175	Q8N4F7	328 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	ZNF473	Q8WTR7	871 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	METTL21A	Q8WXB1	218 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	CAVIN3	Q969G5	261 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	GAL3ST3	Q96A11	431 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	VPS50	Q96JG6	964 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	NSUN5	Q96P11	429 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	CDK15	Q96Q40	435 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	RBCK1	Q9BYM8	510 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	VN1R1	Q9GZP7	353 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	REXO4	Q9GZR2	422 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	CLK4	Q9HAZ1	481 aa	Known RBP	13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	ZNF160	Q9HCG1	818 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	PCTP	Q9UKL6	214 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	CFAP46	Q8IYW2	2715 aa		13.54	□□□□□ -0.24
PTPN6-205	ENST00000534900	CACNA1G	O43497	2377 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900		B8ZZF3	427 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	FAM227A	F5H4B4	570 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	DLX3	O60479	287 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	B4GALT2	O60909	372 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	CDH16	O75309	829 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	CDC123	O75794	336 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	CLDN9	O95484	217 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	FH	P07954	510 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	NUDT17	P0C025	328 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	C8orf89	P0DMQ9	161 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	TSPAN8	P19075	237 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	IL10	P22301	178 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	ARL1	P40616	181 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	CDH13	P55290	713 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	EEF1A2	Q05639	463 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	IFFO1	Q0D2I5	559 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	AIMP2	Q13155	320 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	DDX39B	Q13838	428 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	RUNX2	Q13950	521 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	ADPRM	Q3LIE5	342 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	ABHD17C	Q6PCB6	329 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	TMEM205	Q6UW68	189 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	RPS27L	Q71UM5	84 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	NDUFAF7	Q7L592	441 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	CA13	Q8N1Q1	262 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	L3MBTL4	Q8NA19	623 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	OR2L5	Q8NG80	312 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	OR52B6	Q8NGF0	335 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	TBC1D20	Q96BZ9	403 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	NUDT9	Q9BW91	350 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	ZBTB26	Q9HCK0	441 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	MLXIPL	Q9NP71	852 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	LANCL2	Q9NS86	450 aa		13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.53	□□□□□ -0.24
PTPN6-205	ENST00000534900	ANKRD12	Q6UB98	2062 aa		13.52	□□□□□ -0.24
PTPN6-205	ENST00000534900	NSG1	A0A0A6YYJ2	146 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900		H0YIV9	168 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	SAP18	O00422	153 aa	Known RBP	13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	PPP6C	O00743	305 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	UGDH	O60701	494 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	COX6A1	P12074	109 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	ITGA3	P26006	1051 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	HPD	P32754	393 aa	Predicted RBP	13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	CCT5	P48643	541 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	NEK2	P51955	445 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	CCNG1	P51959	295 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	PGD	P52209	483 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	SOX8	P57073	446 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900		Q0VFX4	171 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	ZRSR2	Q15696	482 aa	Known RBP	13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	UNC50	Q53HI1	259 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	TRIM40	Q6P9F5	258 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	CHSY3	Q70JA7	882 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	UBE3D	Q7Z6J8	389 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	MILR1	Q7Z6M3	343 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	AMER2	Q8N7J2	671 aa		13.52	□□□□□ -0.25
PTPN6-205	ENST00000534900	PLPP5	Q8NEB5	264 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms