RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 TRIM49D1C9J1S8 452 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 POC1B-GALNT4F8VUJ3 575 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 H0YIV9 168 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 J3QKU1 62 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 SGK494L7N484 410 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 E2F3O00716 465 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 CHST10O43529 356 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 CCNT2O60583 730 aaKnown RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 SUPT3HO75486 399 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 SCELO95171 688 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 ALPPP05187 535 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 SERPINA7P05543 415 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 HEXBP07686 556 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 SBK3P0C264 359 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 C8orf89P0DMQ9 161 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 JAK1P23458 1154 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 PIK3CBP42338 1070 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 XCR1P46094 333 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 MAT1AQ00266 395 aaKnown RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 IRF8Q02556 426 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 Q0VFX4 171 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 CHIT1Q13231 466 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 PCOLCEQ15113 449 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 RBBP5Q15291 538 aaKnown RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 UAP1Q16222 522 aaPredicted RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 XKR6Q5GH73 641 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 CRB2Q5IJ48 1285 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 C10orf62Q5T681 223 aaPredicted RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 GRHL2Q6ISB3 625 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 H3F3CQ6NXT2 135 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 ABHD17CQ6PCB6 329 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 Q6ZS92 163 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 RBMXL3Q8N7X1 1067 aaKnown RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 L3MBTL4Q8NA19 623 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 TEX19Q8NA77 164 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 LRRN4CLQ8ND94 238 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 ADAMTS18Q8TE60 1221 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 PPP4R1Q8TF05 950 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 ZNF473Q8WTR7 871 aaKnown RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 METTL21AQ8WXB1 218 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 PSMF1Q92530 271 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 TM9SF4Q92544 642 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 PNPLA2Q96AD5 504 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 TBC1D20Q96BZ9 403 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 WDR77Q9BQA1 342 aaPredicted RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 MS4A8Q9BY19 250 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 ROGDIQ9GZN7 287 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 VN1R1Q9GZP7 353 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 KLHL31Q9H511 634 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 PRDM7Q9NQW5 492 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 C19orf25Q9UFG5 118 aaPredicted RBP9.28□□□□□ -0.92
NUP98-220ENST00000533346 MKL2Q9ULH7 1088 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 MMACHCQ9Y4U1 282 aa9.28□□□□□ -0.92
NUP98-220ENST00000533346 A0A088AWK7 358 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 IGKV3D-11A0A0A0MRZ8 115 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 BLACEA4D250 179 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 C4orf51C9J302 202 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 SLC28A2O43868 658 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 RDH16O75452 317 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 FHP07954 510 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 GSTA1P08263 222 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 ZNF888P0CJ79 500 aaPredicted RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 MYBL2P10244 700 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 NR1D1P20393 614 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 ZNF10P21506 573 aaPredicted RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 HNRNPH1P31943 449 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 SOX11P35716 441 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 PFKFB4Q16877 469 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 GGTA1PQ4G0N0 100 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 DEFB134Q4QY38 66 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 TMEM35AQ53FP2 167 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 AGAP7PQ5VUJ5 663 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 PLAG1Q6DJT9 500 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 RPUSD3Q6P087 351 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 WDR93Q6P2C0 686 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 MED27Q6P2C8 311 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 SHISA6Q6ZSJ9 500 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 SH2D5Q6ZV89 423 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 CPEB2Q7Z5Q1 589 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 PTRH1Q86Y79 214 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 KBTBD2Q8IY47 623 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 CA13Q8N1Q1 262 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 ARMC10Q8N2F6 343 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 MYRIPQ8NFW9 859 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 OR7G3Q8NG95 312 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 ZCCHC10Q8TBK6 192 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 M1APQ8TC57 530 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 MRRFQ96E11 262 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 MAGEB10Q96LZ2 347 aaPredicted RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 AGAP4Q96P64 663 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 SERINC2Q96SA4 455 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 BARD1Q99728 777 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 CCDC77Q9BR77 488 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 TBCDQ9BTW9 1192 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 YIPF2Q9BWQ6 316 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 REXO4Q9GZR2 422 aaKnown RBP9.27□□□□□ -0.93
NUP98-220ENST00000533346 RNF32Q9H0A6 362 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 EPN3Q9H201 632 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 VPS11Q9H270 941 aa9.27□□□□□ -0.93
NUP98-220ENST00000533346 MRPL46Q9H2W6 279 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms