RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 MILR1Q7Z6M3 343 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 C10orf107Q8IVU9 208 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 ZC3H7AQ8IWR0 971 aaKnown RBP11.35□□□□□ -0.59
SSBP3-214ENST00000533209 RNF175Q8N4F7 328 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 CCNYL1Q8N7R7 359 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 OR2L5Q8NG80 312 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 OR4F6Q8NGB9 312 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 HUS1BQ8NHY5 278 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 WDR20Q8TBZ3 569 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 PPP4R1Q8TF05 950 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 MIEF2Q96C03 454 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 QRFPRQ96P65 431 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 F2RL3Q96RI0 385 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 ZNF382Q96SR6 550 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 YIPF2Q9BWQ6 316 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 TGIF2Q9GZN2 237 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 CENPHQ9H3R5 247 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 GSTO2Q9H4Y5 243 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 SOX17Q9H6I2 414 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-214ENST00000533209 MKKSQ9NPJ1 570 aaPredicted RBP11.35□□□□□ -0.59
SSBP3-214ENST00000533209 HCN3Q9P1Z3 774 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 ADGRE2Q9UHX3 823 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 MID2Q9UJV3 735 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 NXT1Q9UKK6 140 aaKnown RBP11.35□□□□□ -0.59
SSBP3-214ENST00000533209 LHX6Q9UPM6 363 aa11.35□□□□□ -0.59
SSBP3-214ENST00000533209 CACNA1GO43497 2377 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 A0A0G2JN53 185 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 ERI3O43414 337 aaKnown RBP11.34□□□□□ -0.59
SSBP3-214ENST00000533209 OR4F21O95013 312 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 MLYCDO95822 493 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 TGFB1P01137 390 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 MYZAPP0CAP1 466 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 ARL1P40616 181 aaPredicted RBP11.34□□□□□ -0.59
SSBP3-214ENST00000533209 CCR10P46092 362 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 NEK2P51955 445 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 PLA2G16P53816 162 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 NAGLUP54802 743 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 BTN3A2P78410 334 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 KLC1Q07866 573 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 LCP2Q13094 533 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 DDX39BQ13838 428 aaKnown RBP11.34□□□□□ -0.59
SSBP3-214ENST00000533209 SSPNQ14714 243 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 TBR1Q16650 682 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 DEFB109BQ30KR1 87 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 DEPDC1Q5TB30 811 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 NIPAL1Q6NVV3 410 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 ABHD17CQ6PCB6 329 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 FRMD7Q6ZUT3 714 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 LAPTM4BQ86VI4 370 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 PRSS58Q8IYP2 241 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 OR5T3Q8NGG3 340 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 OR51Q1Q8NH59 317 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 REPS1Q96D71 796 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 CMTM7Q96FZ5 175 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 MTERF1Q99551 399 aaKnown RBP11.34□□□□□ -0.59
SSBP3-214ENST00000533209 REXO4Q9GZR2 422 aaKnown RBP11.34□□□□□ -0.59
SSBP3-214ENST00000533209 OR51B5Q9H339 312 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 CLK4Q9HAZ1 481 aaKnown RBP11.34□□□□□ -0.59
SSBP3-214ENST00000533209 SSU72Q9NP77 194 aaKnown RBP11.34□□□□□ -0.59
SSBP3-214ENST00000533209 DMRT3Q9NQL9 472 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 C14orf105Q9NVL8 296 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 ACTL7BQ9Y614 415 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 CHD6Q8TD26 2715 aa11.34□□□□□ -0.59
SSBP3-214ENST00000533209 MAGEB17A8MXT2 336 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 FOXE1O00358 373 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 UBFD1O14562 309 aaKnown RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 CHST10O43529 356 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 SH3BGRLO75368 114 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 JRKO75564 520 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 BMP10O95393 424 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 ITGB2P05107 769 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 ALDH3A1P30838 453 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 OTX2P32243 289 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 HPDP32754 393 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 ETV4P43268 484 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 XCR1P46094 333 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 EFNA3P52797 238 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 NAA20P61599 178 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 RPS13P62277 151 aaKnown RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 SKP1P63208 163 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 OLR1P78380 273 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 PHEXP78562 749 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 RHDQ02161 417 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 MPP2Q14168 576 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 TMEM35AQ53FP2 167 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 KHDRBS2Q5VWX1 349 aaKnown RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 LIPMQ5VYY2 423 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 FRG2Q64ET8 278 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 TRIM40Q6P9F5 258 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 GPRIN3Q6ZVF9 776 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 CHSY3Q70JA7 882 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 PPP1R32Q7Z5V6 425 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 MRGPREQ86SM8 312 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 RAB43Q86YS6 212 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 TTC9Q92623 222 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 MTFMTQ96DP5 389 aaKnown RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 FAR2Q96K12 515 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 MAGEB10Q96LZ2 347 aaPredicted RBP11.33□□□□□ -0.6
SSBP3-214ENST00000533209 CATSPER2Q96P56 530 aa11.33□□□□□ -0.6
SSBP3-214ENST00000533209 FRG2BQ96QU4 278 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms