RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 IL10P22301 178 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 HNRNPH1P31943 449 aaKnown RBP14.22□□□□□ -0.13
CPSF1-208ENST00000532560 HNF4AP41235 474 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 XCR1P46094 333 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 LIPJQ5W064 366 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 ADNP2Q6IQ32 1131 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 TCTN3Q6NUS6 607 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 MED27Q6P2C8 311 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 KIRREL2Q6UWL6 708 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 LAPTM4BQ86VI4 370 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 CLEC1AQ8NC01 280 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 FAM76AQ8TAV0 307 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 CCT6BQ92526 530 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 PHF21BQ96EK2 531 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 ABHD17AQ96GS6 310 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 C1QTNF3Q9BXJ4 246 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 KLHL31Q9H511 634 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 TMEM216Q9P0N5 145 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 FBXL4Q9UKA2 621 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 PCTPQ9UKL6 214 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 TSC22D4Q9Y3Q8 395 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 PIEZO2Q9H5I5 2752 aa14.22□□□□□ -0.13
CPSF1-208ENST00000532560 COL6A6A6NMZ7 2263 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 SCN3AQ9NY46 2000 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 SMIM23A6NLE4 172 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 A8MT66 165 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 GOLGA8RI6L899 631 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 ERI3O43414 337 aaKnown RBP14.21□□□□□ -0.13
CPSF1-208ENST00000532560 HEXBP07686 556 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 ACPPP15309 386 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 EMP2P54851 167 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 RAB8AP61006 207 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 LACTB2Q53H82 288 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-208ENST00000532560 SH2D5Q6ZV89 423 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 RIBC1Q8N443 379 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-208ENST00000532560 ZNF843Q8N446 348 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 L3MBTL4Q8NA19 623 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 OR2L5Q8NG80 312 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 OR7G3Q8NG95 312 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 OR11G2Q8NGC1 345 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 OR5T3Q8NGG3 340 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 ZNF473Q8WTR7 871 aaKnown RBP14.21□□□□□ -0.13
CPSF1-208ENST00000532560 MS4A6EQ96DS6 147 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 VN1R1Q9GZP7 353 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 REXO4Q9GZR2 422 aaKnown RBP14.21□□□□□ -0.13
CPSF1-208ENST00000532560 IPPKQ9H8X2 491 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 ACTR8Q9H981 624 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 ADGRE2Q9UHX3 823 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 MED13Q9UHV7 2174 aa14.21□□□□□ -0.13
CPSF1-208ENST00000532560 A0A088AWK7 358 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 A0A1W2PPM1 405 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 H0YIV9 168 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 GLRA3O75311 464 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 JRKO75564 520 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 B3GALT4O96024 378 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 KRT15P19012 456 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 TAC1P20366 129 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 ZNF10P21506 573 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-208ENST00000532560 PIK3CBP42338 1070 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 CCL11P51671 97 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 EFNA3P52797 238 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 SOX8P57073 446 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 AIMP2Q13155 320 aaKnown RBP14.2□□□□□ -0.14
CPSF1-208ENST00000532560 ZSCAN26Q16670 478 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 TRIM40Q6P9F5 258 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 TMEM205Q6UW68 189 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 LRIG3Q6UXM1 1119 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 SHISA5Q8N114 240 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 CYP4X1Q8N118 509 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 OR2W6PQ8NHA6 318 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 ZNF483Q8TF39 744 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-208ENST00000532560 PEX11GQ96HA9 241 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 FAR2Q96K12 515 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 SLC25A23Q9BV35 468 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 MS4A8Q9BY19 250 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 MLXIPLQ9NP71 852 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 DCDC2Q9UHG0 476 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 MKL2Q9ULH7 1088 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 G3BP2Q9UN86 482 aaKnown RBP14.2□□□□□ -0.14
CPSF1-208ENST00000532560 TP53TG5Q9Y2B4 290 aa14.2□□□□□ -0.14
CPSF1-208ENST00000532560 KALRNO60229 2985 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 LOC102723996A0A087X1L8 192 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 OR7A17O14581 309 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 CHST10O43529 356 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 SHOX2O60902 331 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-208ENST00000532560 ALOX12BO75342 701 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 HPP00738 406 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 FHP07954 510 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 C8orf89P0DMQ9 161 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 PCNAP12004 261 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 COX6A1P12074 109 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 JAK1P23458 1154 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 ATP5F1P24539 256 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-208ENST00000532560 CCNG1P51959 295 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 HERVK_113P63132 956 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 OLR1P78380 273 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 TGM3Q08188 693 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 IFFO1Q0D2I5 559 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 TRAF3Q13114 568 aa14.19□□□□□ -0.14
CPSF1-208ENST00000532560 MINDY4Q4G0A6 757 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms