RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 IL7RP16871 459 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 CTPS1P17812 591 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 KDELR1P24390 212 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 CST5P28325 142 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 SMSP52788 366 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 ADIGQ0VDE8 80 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 SMAD4Q13485 552 aaKnown RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 LASP1Q14847 261 aaKnown RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 PPA1Q15181 289 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 UPP1Q16831 310 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 KANK2Q63ZY3 851 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 ANKRD54Q6NXT1 300 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 SLC39A4Q6P5W5 647 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 SAMD14Q8IZD0 417 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 OR10A6Q8NH74 314 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 CNOT9Q92600 299 aaKnown RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 ART4Q93070 314 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 EXOSC8Q96B26 276 aaKnown RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 CPB2Q96IY4 423 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 CDX2Q99626 313 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 MECRQ9BV79 373 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 NUSAP1Q9BXS6 441 aaKnown RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 BTBD1Q9H0C5 482 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 ABCG4Q9H172 646 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 UBE2ZQ9H832 354 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF286AQ9HBT8 521 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 SMCO4Q9NRQ5 59 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 ACTR3BQ9P1U1 418 aa7.02□□□□□ -1.29
CTNND1-229ENST00000531014 UBE2J1Q9Y385 318 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-229ENST00000531014 ARGFXA6NJG6 315 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 H0Y8G0 127 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 J3QLW9 94 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 TOX4O94842 621 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 RCBTB2O95199 551 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 SYPP08247 313 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF19P17023 458 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CXCR1P25024 350 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 ATP5C1P36542 298 aaKnown RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 GALK2Q01415 458 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 SLC6A3Q01959 620 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 LAPTM5Q13571 262 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 DPYSL2Q16555 572 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 MORN1Q5T089 497 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 UBE2UQ5VVX9 321 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 NAPRTQ6XQN6 538 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 TICAM1Q8IUC6 712 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 DEFB106AQ8N104 65 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 SAMD12Q8N8I0 201 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 OR6C4Q8NGE1 309 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 OR6Q1Q8NGQ2 317 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 FNDC8Q8TC99 324 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 PTERQ96BW5 349 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 COPS8Q99627 209 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 FAM83CQ9BQN1 747 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF436Q9C0F3 470 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 KIF25Q9UIL4 384 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 STUB1Q9UNE7 303 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 A0A1W2PS29 197 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 APODP05090 189 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CD3GP09693 182 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 PTPN2P17706 415 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 LPOP22079 712 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CD34P28906 385 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 IL12BP29460 328 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CRHR1P34998 444 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 FOXK2Q01167 660 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 HNRNPA0Q13151 305 aaKnown RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 SNTA1Q13424 505 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CAPSQ13938 189 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CBX2Q14781 532 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 LRIT3Q3SXY7 679 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 SLC39A12Q504Y0 691 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 TLDC1Q6P9B6 456 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CCBE1Q6UXH8 406 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 METTL3Q86U44 580 aaKnown RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF675Q8TD23 568 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 HCAR2Q8TDS4 363 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 ZNF606Q8WXB4 792 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 MS4A4AQ96JQ5 239 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CPXM1Q96SM3 734 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 C8orf33Q9H7E9 229 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 POMPQ9Y244 141 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 TRAV19A0A0A6YYK7 116 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 A0A0J9YVX5 310 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 A0A1W2PPW3 197 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 PRSS44E7EML9 344 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 TPST2O60704 377 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 NFATC1O95644 943 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 ALPPP05187 535 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 ERCC1P07992 297 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 GLRA2P23416 452 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 HOXD12P35452 270 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 CHRNA4P43681 627 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 PNLIPRP1P54315 467 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 HERVK_113P63132 956 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 SNTB2Q13425 540 aaKnown RBP7.01□□□□□ -1.29
CTNND1-229ENST00000531014 DSC3Q14574 896 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 QPCTQ16769 361 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 LY6KQ17RY6 165 aa7.01□□□□□ -1.29
CTNND1-229ENST00000531014 DUPD1Q68J44 220 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms