RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 GAL3ST1Q99999 423 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 STRADBQ9C0K7 418 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 LAMP5Q9UJQ1 280 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 PCDHGA10Q9Y5H3 936 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 A0A096LPI6 279 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 A0A1W2PPL8 197 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 DISC1C4P0D8 188 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 RNF13O43567 381 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 TRAPPC6AO75865 159 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 BCAS2O75934 225 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CLPXO76031 633 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 KAT7O95251 611 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 ARPC4P59998 168 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CREB5Q02930 508 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 GSTM4Q03013 218 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 GBX1Q14549 363 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 TRAM2Q15035 370 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 KIAA1614Q5VZ46 1190 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 THOC7Q6I9Y2 204 aaKnown RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF550Q7Z398 422 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 ASPGQ86U10 573 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 GID4Q8IVV7 300 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 C7orf57Q8NEG2 295 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CEP76Q8TAP6 659 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 OR5P2Q8WZ92 322 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 KLHDC7BQ96G42 594 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 DHRS1Q96LJ7 313 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CITED4Q96RK1 184 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CCDC106Q9BWC9 280 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 SEC61A2Q9H9S3 476 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 PCDHGA3Q9Y5H0 932 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 SH3PXD2BA1X283 911 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 BHMG1C9JSJ3 638 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 FAM189A1O60320 539 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CSTBP04080 98 aaKnown RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CHRM5P08912 532 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CD72P21854 359 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 HYAL2Q12891 473 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 CTU1Q7Z7A3 348 aaKnown RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 TMEM156Q8N614 296 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 FAM86B1Q8N7N1 296 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 LRIG1Q96JA1 1093 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 OR2M4Q96R27 311 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 IL4I1Q96RQ9 567 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 SLC2A11Q9BYW1 496 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 METTL8Q9H825 291 aaKnown RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 PRTFDC1Q9NRG1 225 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 WASF3Q9UPY6 502 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 UNC119BA6NIH7 251 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 EIF1AYO14602 144 aaKnown RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 TSPAN6O43657 245 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 ITGB1P05556 798 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 GALTP07902 379 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 HCKP08631 526 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 FBLP22087 321 aaKnown RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 GADD45AP24522 165 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 AGTR2P50052 363 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 ARFRP1Q13795 201 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 PON3Q15166 354 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 RUNDC3AQ59EK9 446 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 LY6G5CQ5SRR4 150 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 REEP3Q6NUK4 255 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 SUSD1Q6UWL2 747 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 SLC44A3Q8N4M1 653 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 INO80EQ8NBZ0 244 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 PLEKHO2Q8TD55 490 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 THRSPQ92748 146 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 IMP4Q96G21 291 aaKnown RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 FCRL3Q96P31 734 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-227ENST00000530748 TM9SF2Q99805 663 aa8.19□□□□□ -1.1
CTNND1-227ENST00000530748 DFNA5O60443 496 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RNGTTO60942 597 aaKnown RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ARL6IP5O75915 188 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 EPOP01588 193 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 FGF3P11487 239 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 POLR2CP19387 275 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GKP32189 559 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ETV3P41162 512 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 DUSP3P51452 185 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-227ENST00000530748 CDH11P55287 796 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RAB8AP61006 207 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 RING1Q06587 406 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TRAM1Q15629 374 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 NCEH1Q6PIU2 408 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ARL9Q6T311 187 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF367Q7RTV3 350 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 ZNF101Q8IZC7 436 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 OR4K14Q8NGD5 310 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 DMRTB1Q96MA1 342 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 TMEM74Q96NL1 305 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 C12orf4Q9NQ89 552 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 MS4A12Q9NXJ0 267 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PRODH2Q9UF12 536 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 GABRQQ9UN88 632 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 CYP8B1Q9UNU6 501 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 LRRC42Q9Y546 428 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 PRSS51A0A1B0GVH4 220 aa8.18□□□□□ -1.1
CTNND1-227ENST00000530748 A0A1B0GVI7 797 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms