RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 PARP9Q8IXQ6 854 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 AFAP1L2Q8N4X5 818 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 OR5T3Q8NGG3 340 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 ACMSDQ8TDX5 336 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 CREB3L4Q8TEY5 395 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 PPP4R1Q8TF05 950 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 TM9SF4Q92544 642 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 TBC1D20Q96BZ9 403 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 REPS1Q96D71 796 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 OR1F2PQ96R84 312 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 CENPKQ9BS16 269 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 REXO4Q9GZR2 422 aaKnown RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 KLHL31Q9H511 634 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 IPPKQ9H8X2 491 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 CLK4Q9HAZ1 481 aaKnown RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF160Q9HCG1 818 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 RIC8BQ9NVN3 520 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 PCDHGB7Q9Y5F8 929 aa12.65□□□□□ -0.38
CAPN1-215ENST00000528396 V9GYY5 206 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-215ENST00000528396 HELZ2Q9BYK8 2649 aaKnown RBP12.64□□□□□ -0.39
CAPN1-215ENST00000528396 SCN3AQ9NY46 2000 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 MYO18BQ8IUG5 2567 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 LRIT2A6NDA9 550 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 GOLGA8RI6L899 631 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 B3GALT2O43825 422 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 KLK8O60259 260 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 DPM1O60762 260 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 B4GALT2O60909 372 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 JRKO75564 520 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 CDC123O75794 336 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-215ENST00000528396 CEACAM4O75871 244 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 SIX3O95343 332 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-215ENST00000528396 B3GALT4O96024 378 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 FHP07954 510 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 CYC1P08574 325 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 PYGBP11216 843 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 GCAP28676 217 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 CCNG1P51959 295 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 PLA2G16P53816 162 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 VSNL1P62760 191 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 AP2B1P63010 937 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 SNRPNP63162 240 aaKnown RBP12.64□□□□□ -0.39
CAPN1-215ENST00000528396 RCN2Q14257 317 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 NSDHLQ15738 373 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 VWA5B1Q5TIE3 1220 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 GRHL2Q6ISB3 625 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 ATG14Q6ZNE5 492 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 CHSY3Q70JA7 882 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 GOLGA7Q7Z5G4 137 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 HPS6Q86YV9 775 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 KBTBD2Q8IY47 623 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 SRFBP1Q8NEF9 429 aaKnown RBP12.64□□□□□ -0.39
CAPN1-215ENST00000528396 ARMC2Q8NEN0 867 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 OR2L5Q8NG80 312 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 ROGDIQ9GZN7 287 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 VN1R1Q9GZP7 353 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 EPB41L4BQ9H329 900 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 COPG2Q9UBF2 871 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 ADGRE2Q9UHX3 823 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 ANAPC2Q9UJX6 822 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 ZNF490Q9ULM2 529 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-215ENST00000528396 MED13Q9UHV7 2174 aa12.64□□□□□ -0.39
CAPN1-215ENST00000528396 A0A0G2JN53 185 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 LRRC14BA6NHZ5 514 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 STX16-NPEPL1H3BU86 382 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 K7EM74 188 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 MASP2O00187 686 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 STX16O14662 325 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 WFS1O76024 890 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 CLDN9O95484 217 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 SHBGP04278 402 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 GSTA1P08263 222 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 ICAM2P13598 275 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 EPORP19235 508 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 CD22P20273 847 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 HNRNPH1P31943 449 aaKnown RBP12.63□□□□□ -0.39
CAPN1-215ENST00000528396 HSD17B3P37058 310 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 RAP1GDS1P52306 607 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 ACTN3Q08043 901 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-215ENST00000528396 HYAL2Q12891 473 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 ABRAXAS2Q15018 415 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 TMEM35AQ53FP2 167 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 AGAP7PQ5VUJ5 663 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 LIPJQ5W064 366 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 TTC19Q6DKK2 380 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-215ENST00000528396 EMBQ6PCB8 327 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 OR7G3Q8NG95 312 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 MS4A6EQ96DS6 147 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 THOC3Q96J01 351 aaKnown RBP12.63□□□□□ -0.39
CAPN1-215ENST00000528396 AGAP4Q96P64 663 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 KCNC2Q96PR1 638 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 NUDT9Q9BW91 350 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 LHPPQ9H008 270 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 NOL11Q9H8H0 719 aaKnown RBP12.63□□□□□ -0.39
CAPN1-215ENST00000528396 DCDC2Q9UHG0 476 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 MRPS33Q9Y291 106 aaKnown RBP12.63□□□□□ -0.39
CAPN1-215ENST00000528396 PCDHGA11Q9Y5H2 935 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 SPACA6W5XKT8 324 aa12.63□□□□□ -0.39
CAPN1-215ENST00000528396 RP1L1Q8IWN7 2480 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms