RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SNUPNO95149 360 aaKnown RBP13.02□□□□□ -0.33
CD44-224ENST00000526669 GBAP04062 536 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ADRB1P08588 477 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 SMIM10L1P0DMW3 83 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 HSD3B1P14060 373 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ALOX12P18054 663 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 PTX3P26022 381 aaPredicted RBP13.02□□□□□ -0.33
CD44-224ENST00000526669 HSD3B2P26439 372 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 CERS1P27544 350 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 SSR2P43308 183 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ARSFP54793 590 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 BTN3A2P78410 334 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 SYT16Q17RD7 645 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 FAM214AQ32MH5 1076 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ADPRMQ3LIE5 342 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 GALNTL6Q49A17 601 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 SPDYAQ5MJ70 313 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 VWA5B1Q5TIE3 1220 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 GARNL3Q5VVW2 1013 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 RHBDD2Q6NTF9 364 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ABHD17CQ6PCB6 329 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ZNF793Q6ZN11 406 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ABHD13Q7L211 337 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ZFAND4Q86XD8 727 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 PIWIL2Q8TC59 973 aaKnown RBP13.02□□□□□ -0.33
CD44-224ENST00000526669 RGMAQ96B86 450 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 NXPE2Q96DL1 559 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 C19orf60Q96EN9 201 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 MMABQ96EY8 250 aaPredicted RBP13.02□□□□□ -0.33
CD44-224ENST00000526669 APIPQ96GX9 242 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 SMIM10Q96HG1 83 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 SLC46A1Q96NT5 459 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 TEFMQ96QE5 360 aaKnown RBP13.02□□□□□ -0.33
CD44-224ENST00000526669 ZPBPQ9BS86 351 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 ASPSCR1Q9BZE9 553 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 NRSN2Q9GZP1 204 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 CCDC134Q9H6E4 229 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 COPS7BQ9H9Q2 264 aaPredicted RBP13.02□□□□□ -0.33
CD44-224ENST00000526669 ASCL3Q9NQ33 180 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 HCN3Q9P1Z3 774 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 VPS29Q9UBQ0 182 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 SRPK3Q9UPE1 567 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 NAALAD2Q9Y3Q0 740 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 NEUROG3Q9Y4Z2 214 aa13.02□□□□□ -0.33
CD44-224ENST00000526669 TMEM184BQ9Y519 407 aaPredicted RBP13.02□□□□□ -0.33
CD44-224ENST00000526669 GOLGA8QA0A0J9YX86 632 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 A0A1B0GX78 115 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 GOLGA8OA6NCC3 632 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 CDRT15L2A8MXV6 281 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 GOLGA8NF8WBI6 632 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 RGS14O43566 566 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 DNAJB6O75190 326 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 EEDO75530 441 aaKnown RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 DLGAP3O95886 979 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 ITGAXP20702 1163 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 AVPR1BP47901 424 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 MAT1AQ00266 395 aaKnown RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 TGM3Q08188 693 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 SLC9B1Q4ZJI4 515 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 MANEAQ5SRI9 462 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 ARHGAP40Q5TG30 622 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 YOD1Q5VVQ6 348 aaPredicted RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 LCN10Q6JVE6 187 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 FAM199XQ6PEV8 388 aaPredicted RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 RIPOR1Q6ZS17 1223 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 Q6ZSR9 355 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 TIPARPQ7Z3E1 657 aaKnown RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 MAVSQ7Z434 540 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 DSELQ8IZU8 1212 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 C1orf52Q8N6N3 182 aaKnown RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 GBP7Q8N8V2 638 aaPredicted RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 OR5T3Q8NGG3 340 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 MR1Q95460 341 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 FAR2Q96K12 515 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 QRFPRQ96P65 431 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 CENPKQ9BS16 269 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 YIPF2Q9BWQ6 316 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 EBPLQ9BY08 206 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 AKIRIN1Q9H9L7 192 aaPredicted RBP13.01□□□□□ -0.33
CD44-224ENST00000526669 LHX9Q9NQ69 397 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 PPT2Q9UMR5 302 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 MSRB2Q9Y3D2 182 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 PCDHGA3Q9Y5H0 932 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 USH1CQ9Y6N9 552 aa13.01□□□□□ -0.33
CD44-224ENST00000526669 MED19A0JLT2 244 aaPredicted RBP13□□□□□ -0.33
CD44-224ENST00000526669 SDHDO14521 159 aa13□□□□□ -0.33
CD44-224ENST00000526669 HDAC3O15379 428 aa13□□□□□ -0.33
CD44-224ENST00000526669 NVLO15381 856 aaKnown RBP13□□□□□ -0.33
CD44-224ENST00000526669 GALR3O60755 368 aaPredicted RBP13□□□□□ -0.33
CD44-224ENST00000526669 PEX11AO75192 247 aa13□□□□□ -0.33
CD44-224ENST00000526669 NSA2O95478 260 aaKnown RBP13□□□□□ -0.33
CD44-224ENST00000526669 HBQ1P09105 142 aa13□□□□□ -0.33
CD44-224ENST00000526669 FBLP22087 321 aaKnown RBP13□□□□□ -0.33
CD44-224ENST00000526669 ATP5A1P25705 553 aaKnown RBP13□□□□□ -0.33
CD44-224ENST00000526669 RORAP35398 523 aa13□□□□□ -0.33
CD44-224ENST00000526669 BSGP35613 385 aa13□□□□□ -0.33
CD44-224ENST00000526669 RPL38P63173 70 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms