RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 DNAJB14Q8TBM8 379 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 SLC44A1Q8WWI5 657 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 CCT6BQ92526 530 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 TSLPQ969D9 159 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 TBC1D20Q96BZ9 403 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 WDR77Q9BQA1 342 aaPredicted RBP16.02■□□□□ 0.16
CCS-203ENST00000526058 TUBB6Q9BUF5 446 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 ILKAPQ9H0C8 392 aaPredicted RBP16.02■□□□□ 0.16
CCS-203ENST00000526058 EHD1Q9H4M9 534 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 NT5DC2Q9H857 520 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 NFU1Q9UMS0 254 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 DOPEY2Q9Y3R5 2298 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 A0A0G2JN53 185 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 LRIT2A6NDA9 550 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 B4GALT2O60909 372 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 KLHL2O95198 593 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 IL10P22301 178 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 SOX11P35716 441 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 UQCRFS1P47985 274 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 SERPINB8P50452 374 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 SKP1P63208 163 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 CHIT1Q13231 466 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 MFAP5Q13361 173 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 ABRAXAS2Q15018 415 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 NSDHLQ15738 373 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 FAM83EQ2M2I3 478 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 CRB2Q5IJ48 1285 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 B3GNTL1Q67FW5 361 aaPredicted RBP16.01■□□□□ 0.15
CCS-203ENST00000526058 NIPAL1Q6NVV3 410 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 RIPOR1Q6ZS17 1223 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 LRRC70Q7Z2Q7 622 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 CCDC91Q7Z6B0 441 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 ATCAYQ86WG3 371 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 IQCKQ8N0W5 287 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 PLD6Q8N2A8 252 aaKnown RBP16.01■□□□□ 0.15
CCS-203ENST00000526058 CISD2Q8N5K1 135 aaKnown RBP16.01■□□□□ 0.15
CCS-203ENST00000526058 TTLQ8NG68 377 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 RHEBL1Q8TAI7 183 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 PPP4R1Q8TF05 950 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 SNRNP40Q96DI7 357 aaKnown RBP16.01■□□□□ 0.15
CCS-203ENST00000526058 MS4A6EQ96DS6 147 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 WDR34Q96EX3 536 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 PTCD3Q96EY7 689 aaKnown RBP16.01■□□□□ 0.15
CCS-203ENST00000526058 CNDP1Q96KN2 507 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 GPR78Q96P69 363 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 LMF1Q96S06 567 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 PAFAH2Q99487 392 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 RHBGQ9H310 441 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 EPS8L2Q9H6S3 715 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 PLA2G3Q9NZ20 509 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 MAP10Q9P2G4 905 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 C19orf25Q9UFG5 118 aaPredicted RBP16.01■□□□□ 0.15
CCS-203ENST00000526058 ESPL1Q14674 2120 aa16.01■□□□□ 0.15
CCS-203ENST00000526058 ANKDD1BA6NHY2 528 aa16■□□□□ 0.15
CCS-203ENST00000526058 FAM227AF5H4B4 570 aa16■□□□□ 0.15
CCS-203ENST00000526058 POC1B-GALNT4F8VUJ3 575 aa16■□□□□ 0.15
CCS-203ENST00000526058 VPS4BO75351 444 aa16■□□□□ 0.15
CCS-203ENST00000526058 CLEC3AO75596 197 aa16■□□□□ 0.15
CCS-203ENST00000526058 WFS1O76024 890 aa16■□□□□ 0.15
CCS-203ENST00000526058 INHBAP08476 426 aa16■□□□□ 0.15
CCS-203ENST00000526058 ICAM2P13598 275 aa16■□□□□ 0.15
CCS-203ENST00000526058 STXBP1P61764 594 aaKnown RBP16■□□□□ 0.15
CCS-203ENST00000526058 BTN3A2P78410 334 aa16■□□□□ 0.15
CCS-203ENST00000526058 BTG2P78543 158 aa16■□□□□ 0.15
CCS-203ENST00000526058 IRF8Q02556 426 aa16■□□□□ 0.15
CCS-203ENST00000526058 ACAP2Q15057 778 aa16■□□□□ 0.15
CCS-203ENST00000526058 CA13Q8N1Q1 262 aa16■□□□□ 0.15
CCS-203ENST00000526058 LRRN4CLQ8ND94 238 aa16■□□□□ 0.15
CCS-203ENST00000526058 CATSPER1Q8NEC5 780 aa16■□□□□ 0.15
CCS-203ENST00000526058 UBTD2Q8WUN7 234 aa16■□□□□ 0.15
CCS-203ENST00000526058 GAL3ST3Q96A11 431 aa16■□□□□ 0.15
CCS-203ENST00000526058 EFCAB11Q9BUY7 163 aa16■□□□□ 0.15
CCS-203ENST00000526058 PITHD1Q9GZP4 211 aaPredicted RBP16■□□□□ 0.15
CCS-203ENST00000526058 VPS11Q9H270 941 aa16■□□□□ 0.15
CCS-203ENST00000526058 ASF1BQ9NVP2 202 aa16■□□□□ 0.15
CCS-203ENST00000526058 ZNF358Q9NW07 568 aa16■□□□□ 0.15
CCS-203ENST00000526058 OPTCQ9UBM4 332 aa16■□□□□ 0.15
CCS-203ENST00000526058 VPS4AQ9UN37 437 aa16■□□□□ 0.15
CCS-203ENST00000526058 PCDHGA10Q9Y5H3 936 aa16■□□□□ 0.15
CCS-203ENST00000526058 SYCE1LA8MT33 242 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 MAGEB17A8MXT2 336 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 K7EPI3 171 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 ERI3O43414 337 aaKnown RBP15.99■□□□□ 0.15
CCS-203ENST00000526058 RHOXF2BP0C7M4 288 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 GNLYP22749 145 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 GSTM2P28161 218 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 MAGEA12P43365 314 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 SRSF1Q07955 248 aaKnown RBP eCLIP15.99■□□□□ 0.152e-7■□□□□ 11
CCS-203ENST00000526058 TBCCQ15814 346 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 PFKFB4Q16877 469 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 BTBD16Q32M84 506 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 SFT2D3Q587I9 215 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 GALNT11Q8NCW6 608 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 DCAKDQ8WVC6 231 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 SEC16BQ96JE7 1060 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 FAR2Q96K12 515 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 PTCHD1Q96NR3 888 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 RHOXF2Q9BQY4 288 aa15.99■□□□□ 0.15
CCS-203ENST00000526058 CLK4Q9HAZ1 481 aaKnown RBP15.99■□□□□ 0.15
CCS-203ENST00000526058 NTNG1Q9Y2I2 539 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms