RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 F10P00742 488 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 ALDOAP04075 364 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 FHP07954 510 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 INHBAP08476 426 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 MTHFD2P13995 350 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 GNLYP22749 145 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 SERPINB8P50452 374 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 STXBP1P61764 594 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 BTG2P78543 158 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 RHAGQ02094 409 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 IRF8Q02556 426 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 MFAP5Q13361 173 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 ABRAXAS2Q15018 415 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 NSDHLQ15738 373 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 FAM83EQ2M2I3 478 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 SFT2D3Q587I9 215 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 IGFL2Q6UWQ7 119 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 Q6ZS92 163 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 VN1R5Q7Z5H4 357 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 IFT20Q8IY31 132 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 PLD6Q8N2A8 252 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 TBC1D20Q96BZ9 403 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 SNRNP40Q96DI7 357 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 PTCD3Q96EY7 689 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 OR1F2PQ96R84 312 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 PAFAH2Q99487 392 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 WDR77Q9BQA1 342 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 TUBB6Q9BUF5 446 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 FUT8Q9BYC5 575 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 EPS8L2Q9H6S3 715 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 NT5DC2Q9H857 520 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 ZNF358Q9NW07 568 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 OPTCQ9UBM4 332 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 C19orf25Q9UFG5 118 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 VPS4AQ9UN37 437 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 IKBKGQ9Y6K9 419 aa12.1□□□□□ -0.47
TRAPPC4-205ENST00000525079 LRIT2A6NDA9 550 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 A8MUI8 341 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 K7EPI3 171 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 PCDH17O14917 1159 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 ERI3O43414 337 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 SH3BGRLO75368 114 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 TBX6O95947 436 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 GFAPP14136 432 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 IL10P22301 178 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 MSH2P43246 934 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 ST13P50502 369 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 PLA2G16P53816 162 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 SKP1P63208 163 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 RUNX2Q13950 521 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 ACAP2Q15057 778 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 PFKFB4Q16877 469 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 BTBD16Q32M84 506 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 CRB2Q5IJ48 1285 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 FCRLBQ6BAA4 426 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 NIPAL1Q6NVV3 410 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 LRRC70Q7Z2Q7 622 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 IQCKQ8N0W5 287 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 CYP4X1Q8N118 509 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 CA13Q8N1Q1 262 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 TEX9Q8N6V9 391 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 PLPP5Q8NEB5 264 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 TTLQ8NG68 377 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 DCAKDQ8WVC6 231 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 GAL3ST3Q96A11 431 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 MS4A6EQ96DS6 147 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 FAR2Q96K12 515 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 PTCHD1Q96NR3 888 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 GPR78Q96P69 363 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 F2RL3Q96RI0 385 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 LMF1Q96S06 567 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 EFCAB11Q9BUY7 163 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 EHD1Q9H4M9 534 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 ASF1BQ9NVP2 202 aa12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 CPSF2Q9P2I0 782 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-205ENST00000525079 UBR5O95071 2799 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 A0A087WUV0 522 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 SYCE1LA8MT33 242 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 A8MUA0 341 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 MAGEB17A8MXT2 336 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 TRIM49D1C9J1S8 452 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 PSMD12O00232 456 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 CLEC3AO75596 197 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 CYC1P08574 325 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 FAM153BP0C7A2 387 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 PCNAP12004 261 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 RNH1P13489 461 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 ICAM2P13598 275 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 MAOAP21397 527 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 JAK1P23458 1154 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 SOX11P35716 441 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 OR4D2P58180 307 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 ARG2P78540 354 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 LAPTM5Q13571 262 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 HIST2H2ACQ16777 129 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 FAM153CQ494X1 144 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 PAGE2BQ5JRK9 111 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 HIST2H2AA3Q6FI13 130 aa12.08□□□□□ -0.48
TRAPPC4-205ENST00000525079 KLC3Q6P597 504 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms