RNA–Protein interactions for RNA: ENST00000522719.2

NKX2-1-204, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-204ENST00000522719 SLC39A1Q9NY26 324 aa24.41■■□□□ 1.5
NKX2-1-204ENST00000522719 SRPK3Q9UPE1 567 aa24.41■■□□□ 1.5
NKX2-1-204ENST00000522719 TMED5Q9Y3A6 229 aa24.41■■□□□ 1.5
NKX2-1-204ENST00000522719 SEC16AO15027 2179 aa24.41■■□□□ 1.5
NKX2-1-204ENST00000522719 A0A088AWK7 358 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 SAP18O00422 153 aaKnown RBP24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 PLPP1O14494 284 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 PLD2O14939 933 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 PEX11AO75192 247 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 ZNF888P0CJ79 500 aaPredicted RBP24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 ALOX12P18054 663 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 LBPP18428 481 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 ZNF10P21506 573 aaPredicted RBP24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 GCGRP47871 477 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 ARFIP2P53365 341 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 GALNTL6Q49A17 601 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 C6orf136Q5SQH8 315 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 PAGE2Q7Z2X7 111 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 UBE3DQ7Z6J8 389 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 APIPQ96GX9 242 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 EBF4Q9BQW3 602 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 NDC1Q9BTX1 674 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 CUTCQ9NTM9 273 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 ADAM29Q9UKF5 820 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 PCDHB3Q9Y5E6 796 aa24.4■■□□□ 1.5
NKX2-1-204ENST00000522719 GOLGA8QA0A0J9YX86 632 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 GOLGA8OA6NCC3 632 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 GOLGA8NF8WBI6 632 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 HYAL3O43820 417 aaPredicted RBP24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 SNX3O60493 162 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 JMJD7P0C870 316 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 PLA2G16P53816 162 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 SKP1P63208 163 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 MAD2L1Q13257 205 aaPredicted RBP24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 PUM1Q14671 1186 aaKnown RBP eCLIP24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 KIAA0040Q15053 153 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 OR4C11Q6IEV9 310 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 OGFOD2Q6N063 350 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 GALNT18Q6P9A2 607 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 CEACAM20Q6UY09 585 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 ZCCHC10Q8TBK6 192 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 C11orf24Q96F05 449 aaPredicted RBP24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 C10orf90Q96M02 699 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 QRFPRQ96P65 431 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 C17orf62Q9BQA9 187 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 ZPBPQ9BS86 351 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 TMEM120AQ9BXJ8 343 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 APMAPQ9HDC9 416 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 PRDM7Q9NQW5 492 aa24.39■■□□□ 1.5
NKX2-1-204ENST00000522719 ZNF749O43361 778 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 HBQ1P09105 142 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 ACPPP15309 386 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 BSGP35613 385 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 RAB8AP61006 207 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 LSM12Q3MHD2 195 aaKnown RBP24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 NXNQ6DKJ4 435 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 DGLUCYQ7Z3D6 616 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 COMMD6Q7Z4G1 85 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 PIGWQ7Z7B1 504 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 NUDT13Q86X67 352 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 TMEM126BQ8IUX1 230 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 PARP9Q8IXQ6 854 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 C1orf52Q8N6N3 182 aaKnown RBP24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 C10orf82Q8WW14 230 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 MVB12AQ96EY5 273 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 TEFMQ96QE5 360 aaKnown RBP24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 OR52B2Q96RD2 323 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 TAAR9Q96RI9 348 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 ZNF717Q9BY31 904 aaPredicted RBP24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 DDX31Q9H8H2 851 aaKnown RBP24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 ANKHQ9HCJ1 492 aa24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 MRPS2Q9Y399 296 aaKnown RBP24.38■■□□□ 1.49
NKX2-1-204ENST00000522719 C4orf51C9J302 202 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 SCRG1O75711 98 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 MYO1DO94832 1006 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 SSR2P43308 183 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 ERVK-8P63133 956 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 EMX2Q04743 252 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 RFTN2Q52LD8 501 aaPredicted RBP24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 DCAF12Q5T6F0 453 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 PWWP2BQ6NUJ5 590 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 FNDC5Q8NAU1 212 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 DDA1Q9BW61 102 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 ASPSCR1Q9BZE9 553 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 COPS7BQ9H9Q2 264 aaPredicted RBP24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 LHX9Q9NQ69 397 aa24.37■■□□□ 1.49
NKX2-1-204ENST00000522719 GALR3O60755 368 aaPredicted RBP24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 SCELO95171 688 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 ITIH1P19827 911 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 HIST1H1TP22492 207 aaPredicted RBP24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 MAPK1P28482 360 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 MTTPP55157 894 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 RPL38P63173 70 aaKnown RBP24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 BTN3A2P78410 334 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 RHBDD2Q6NTF9 364 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 SPATA19Q7Z5L4 167 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 ZCCHC7Q8N3Z6 543 aaKnown RBP24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 FCRL1Q96LA6 429 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 RILPQ96NA2 401 aa24.36■■□□□ 1.49
NKX2-1-204ENST00000522719 SERINC2Q96SA4 455 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms