RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 NSG1A0A0A6YYJ2 146 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 CDC123O75794 336 aaPredicted RBP19.48■□□□□ 0.71
TRIM35-203ENST00000521253 SIX3O95343 332 aaPredicted RBP19.48■□□□□ 0.71
TRIM35-203ENST00000521253 CYC1P08574 325 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 IL10P22301 178 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 CASRP41180 1078 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 PCBP2Q15366 365 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRIM35-203ENST00000521253 HIST2H2ACQ16777 129 aaPredicted RBP19.48■□□□□ 0.71
TRIM35-203ENST00000521253 HIST2H2AA3Q6FI13 130 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 PTGR2Q8N8N7 351 aaPredicted RBP19.48■□□□□ 0.71
TRIM35-203ENST00000521253 METTL21AQ8WXB1 218 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 TBC1D20Q96BZ9 403 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 MS4A6EQ96DS6 147 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 C5AR2Q9P296 337 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 PSMC3IPQ9P2W1 217 aaPredicted RBP19.48■□□□□ 0.71
TRIM35-203ENST00000521253 ANGPTL3Q9Y5C1 460 aa19.48■□□□□ 0.71
TRIM35-203ENST00000521253 TNPO3Q9Y5L0 923 aaKnown RBP19.48■□□□□ 0.71
TRIM35-203ENST00000521253 TNRC6AQ8NDV7 1962 aaKnown RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 A0A0G2JN53 185 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 IQANK1A0A1B0GTG1 560 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 ERI3O43414 337 aaKnown RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 ALPPP05187 535 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 FHP07954 510 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 BTN3A2P78410 334 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 RHAGQ02094 409 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 PCOLCEQ15113 449 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 ADPRMQ3LIE5 342 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 NADK2Q4G0N4 442 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 LANCL3Q6ZV70 420 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 GOLGA7Q7Z5G4 137 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 UBLCP1Q8WVY7 318 aaPredicted RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 UBE2E3Q969T4 207 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 PHF21BQ96EK2 531 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 THOC3Q96J01 351 aaKnown RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 MRPL57Q9BQC6 102 aaKnown RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 CCDC77Q9BR77 488 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 TRIM4Q9C037 500 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 REXO4Q9GZR2 422 aaKnown RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 LHPPQ9H008 270 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 ZNF700Q9H0M5 742 aa19.47■□□□□ 0.71
TRIM35-203ENST00000521253 MRPL46Q9H2W6 279 aaKnown RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 CLK4Q9HAZ1 481 aaKnown RBP19.47■□□□□ 0.71
TRIM35-203ENST00000521253 J3QKU1 62 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 E2F3O00716 465 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 KLHL41O60662 606 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 DPM1O60762 260 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 SHBGP04278 402 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 PLA2G16P53816 162 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 TLE1Q04724 770 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 GTF2H2Q13888 395 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 IRAK1BP1Q5VVH5 260 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 GRHL2Q6ISB3 625 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 GTF2H2CQ6P1K8 395 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 METTL2BQ6P1Q9 378 aaKnown RBP19.46■□□□□ 0.71
TRIM35-203ENST00000521253 MED27Q6P2C8 311 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 HPS6Q86YV9 775 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 LAS2Q8IYD9 372 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 OR2L5Q8NG80 312 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 ZNF473Q8WTR7 871 aaKnown RBP19.46■□□□□ 0.71
TRIM35-203ENST00000521253 FAR2Q96K12 515 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 ZBTB20Q9HC78 741 aaPredicted RBP19.46■□□□□ 0.71
TRIM35-203ENST00000521253 RIC8BQ9NVN3 520 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 TMCO1Q9UM00 188 aa19.46■□□□□ 0.71
TRIM35-203ENST00000521253 BAHCC1Q9P281 2608 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 PRRC2CQ9Y520 2896 aaKnown RBP19.45■□□□□ 0.7
TRIM35-203ENST00000521253 IGHV3-20A0A0C4DH32 117 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 ESPNB1AK53 854 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 STX16-NPEPL1H3BU86 382 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 PYCARD-AS1I3L0S3 204 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 STX16O14662 325 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 B4GALT2O60909 372 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 SMIM24O75264 130 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 SBK3P0C264 359 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 PCNAP12004 261 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 EEF1DP29692 281 aaKnown RBP19.45■□□□□ 0.7
TRIM35-203ENST00000521253 HPDP32754 393 aaPredicted RBP19.45■□□□□ 0.7
TRIM35-203ENST00000521253 PIK3CGP48736 1102 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 VSNL1P62760 191 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 ANKRD37Q7Z713 158 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 MYLK4Q86YV6 388 aaPredicted RBP19.45■□□□□ 0.7
TRIM35-203ENST00000521253 KBTBD2Q8IY47 623 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 CA13Q8N1Q1 262 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 TMEM151AQ8N4L1 468 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 AMER2Q8N7J2 671 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 RBMXL3Q8N7X1 1067 aaKnown RBP19.45■□□□□ 0.7
TRIM35-203ENST00000521253 PLPP5Q8NEB5 264 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 OR7G3Q8NG95 312 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 MZB1Q8WU39 189 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 TSLPQ969D9 159 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 F2RL3Q96RI0 385 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 MFRPQ9BY79 579 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 IPPKQ9H8X2 491 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 ACTR8Q9H981 624 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 C19orf25Q9UFG5 118 aaPredicted RBP19.45■□□□□ 0.7
TRIM35-203ENST00000521253 TBK1Q9UHD2 729 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 TENM4Q6N022 2769 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 NUP210LQ5VU65 1888 aa19.45■□□□□ 0.7
TRIM35-203ENST00000521253 SLU7O95391 586 aaKnown RBP19.44■□□□□ 0.7
TRIM35-203ENST00000521253 SERPINA7P05543 415 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms