RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 SLC28A1O00337 649 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 LSM1O15116 133 aaKnown RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 KRT6AP02538 564 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 KRT6BP04259 564 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 CDH1P12830 882 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 CTSEP14091 401 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 LBPP18428 481 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 PIK3R1P27986 724 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 PSMB5P28074 263 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 NDUFS1P28331 727 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 PEBP1P30086 187 aaKnown RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ADSLP30566 484 aaPredicted RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 HNF4AP41235 474 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 KRT6CP48668 564 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 AFF3P51826 1226 aaKnown RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ZNF33BQ06732 778 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 TSTA3Q13630 321 aaPredicted RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 COL9A2Q14055 689 aaPredicted RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 KRT33BQ14525 404 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 NAA25Q14CX7 972 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 PLK5Q496M5 336 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 LYSMD4Q5XG99 296 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 FRG2Q64ET8 278 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ADNP2Q6IQ32 1131 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 TTLL10Q6ZVT0 673 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 SPATA19Q7Z5L4 167 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 BMP8AQ7Z5Y6 402 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 TAF8Q7Z7C8 310 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 FAM129CQ86XR2 697 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 MYLK4Q86YV6 388 aaPredicted RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ADGRF3Q8IZF5 1079 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 NAGSQ8N159 534 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ABHD11Q8NFV4 315 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 OR4K1Q8NGD4 311 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 OR2A1Q8NGT9 310 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 FLVCR1-AS1Q8TAF5 88 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 SLC5A11Q8WWX8 675 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 LCN9Q8WX39 176 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 JPH3Q8WXH2 748 aaPredicted RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 CXorf40BQ96DE9 158 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 MTFMTQ96DP5 389 aaKnown RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 NSL1Q96IY1 281 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ZC3H10Q96K80 434 aaKnown RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 FRG2BQ96QU4 278 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 HAUS8Q9BT25 410 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 CDADC1Q9BWV3 514 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 RAB11FIP5Q9BXF6 653 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ACPTQ9BZG2 426 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 PCBD2Q9H0N5 130 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 LRMDAQ9H2I8 198 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 SPNS1Q9H2V7 528 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 ERVMER34-1Q9H9K5 563 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 PFDN4Q9NQP4 134 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 TMEM74BQ9NUR3 256 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 SIRT5Q9NXA8 310 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 SPHK1Q9NYA1 384 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 CPNE7Q9UBL6 633 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 TAC3Q9UHF0 121 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 PILRBQ9UKJ0 227 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 FBXO4Q9UKT5 387 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 SNX6Q9UNH7 406 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 GPR55Q9Y2T6 319 aaPredicted RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 GPR45Q9Y5Y3 372 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 COPG1Q9Y678 874 aaKnown RBP7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 VCANP13611 3396 aa7.53□□□□□ -1.2
CTHRC1-203ENST00000520337 IGKV1-8A0A0C4DH67 115 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 KIR2DS5A0A0G2JLQ3 304 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 A0A0G2JNG1 304 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 A0A1B0GTW7 788 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 PIPSLA2A3N6 862 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 KIR2DS3K7RE56 304 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 BTN3A3O00478 584 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 UBDO15205 165 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 SLC22A2O15244 555 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 YY2O15391 372 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 PEX11AO75192 247 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 CHRM5P08912 532 aaPredicted RBP7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 GPX3P22352 226 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 PRPH2P23942 346 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 PRDX6P30041 224 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 SHMT2P34897 504 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 GCKP35557 465 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 DHPSP49366 369 aaPredicted RBP7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 MRPL19P49406 292 aaKnown RBP7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 ATP4BP51164 291 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 DIO3P55073 304 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 C21orf59P57076 290 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 ERVK-8P63133 956 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 IRX1P78414 480 aaPredicted RBP7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 SRSF3P84103 164 aaKnown RBP7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 HMGCS1Q01581 520 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 EMX2Q04743 252 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 PRDX1Q06830 199 aaKnown RBP7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 GPR18Q14330 331 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 SQLEQ14534 574 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 KIR2DS5Q14953 304 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 KIAA0040Q15053 153 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 SHBQ15464 509 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 KIF19Q2TAC6 998 aa7.52□□□□□ -1.21
CTHRC1-203ENST00000520337 SMU1Q2TAY7 513 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms