RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 SLC35A5Q9BS91 424 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 EXTL2Q9UBQ6 330 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 TPPPO94811 219 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 CH25HO95992 272 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 JUPP14923 745 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 OR3A3P47888 321 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 OR3A2P47893 321 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 CLCN7P51798 805 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 CREB5Q02930 508 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 ZNF529Q6P280 563 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 CEP68Q76N32 757 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 C3orf49Q96BT1 292 aa8.44□□□□□ -1.06
CSMD1-206ENST00000520002 FAM234BA2RU67 622 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 EEFSECP57772 596 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 EPGNQ6UW88 154 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TAC4Q86UU9 113 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 SIRPGQ9P1W8 387 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CLDN4O14493 209 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PAHP00439 452 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CMPK1P30085 196 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 ALDH3B2P48448 385 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 DGKQP52824 942 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 NDST2P52849 883 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 OR2T5Q6IEZ7 315 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 OR2T29Q8NH02 315 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CLEC4CQ8WTT0 213 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 RRNAD1Q96FB5 475 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 H0YGN5 161 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TOR1AO14656 332 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 UPK1BO75841 260 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 HOXA10P31260 410 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PDX1P52945 283 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 HTRA4P83105 476 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 COL9A3Q14050 684 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 NDUFA9Q16795 377 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 MPP7Q5T2T1 576 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TSPAN33Q86UF1 283 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 OR13J1Q8NGT2 312 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 RANGRFQ9HD47 186 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 NFS1Q9Y697 457 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TCRBV7S3A2A0A539 114 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 SCGB1D1O95968 90 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PRNPP04156 253 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 GK3PQ14409 553 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 UBXN11Q5T124 520 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PXDC1Q5TGL8 231 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CIDECQ96AQ7 238 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 SLC35G5Q96KT7 338 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 RPL10LQ96L21 214 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PKP4Q99569 1192 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CRB3Q9BUF7 120 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TRMT61BQ9BVS5 477 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 HSD3B7Q9H2F3 369 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 GTF2IRD1Q9UHL9 959 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TTC24A2A3L6 582 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 OR51F1A6NGY5 319 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 C4BPAP04003 597 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 OR6Q1Q8NGQ2 317 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CDK15Q96Q40 435 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 MTG2Q9H4K7 406 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TLE6Q9H808 572 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 EIF2B3Q9NR50 452 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 DUS2Q9NX74 493 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 DCCP43146 1447 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 A0A1W2PRQ8 180 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 HTR7P34969 479 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 ST3GAL4Q11206 333 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TAF1AQ15573 450 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 EXOC3L2Q2M3D2 409 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 RPS27LQ71UM5 84 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 MED30Q96HR3 178 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 SH2B3Q9UQQ2 575 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CBY3A6NI87 242 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 LCMT2O60294 686 aaKnown RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 FGF19O95750 216 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 STATHP02808 62 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 C8GP07360 202 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 SP3Q02447 781 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PTP4A2Q12974 167 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 HSDL1Q3SXM5 330 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TSTD2Q5T7W7 516 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 C22orf42Q6IC83 251 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 FSTL5Q8N475 847 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 SPPL2BQ8TCT7 592 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 SLC25A36Q96CQ1 311 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TMEM80Q96HE8 168 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 ALPK1Q96QP1 1244 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TREX2Q9BQ50 279 aaPredicted RBP8.43□□□□□ -1.06
CSMD1-206ENST00000520002 ALKBH4Q9NXW9 302 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 GLS2Q9UI32 602 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 CNTN6Q9UQ52 1028 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 C2CD4BA6NLJ0 364 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 TGM6O95932 706 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 LMO2P25791 158 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 NFKB2Q00653 900 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 AMZ1Q400G9 498 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 ETFRF1Q6IPR1 90 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 ZNF367Q7RTV3 350 aa8.43□□□□□ -1.06
CSMD1-206ENST00000520002 PCDHB3Q9Y5E6 796 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms