RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 NDC80O14777 642 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 HNRNPRO43390 633 aaKnown RBP11.66□□□□□ -0.54
CSMD1-205ENST00000519623 WISP3O95389 354 aaPredicted RBP11.66□□□□□ -0.54
CSMD1-205ENST00000519623 SP1P08047 785 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 CD46P15529 392 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 GDF5P43026 501 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 GNG11P61952 73 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 ART3Q13508 389 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 RBBP5Q15291 538 aaKnown RBP11.66□□□□□ -0.54
CSMD1-205ENST00000519623 C18orf21Q32NC0 220 aaPredicted RBP11.66□□□□□ -0.54
CSMD1-205ENST00000519623 SLC25A25Q6KCM7 469 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 SLCO4C1Q6ZQN7 724 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 ZNF227Q86WZ6 799 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 KLHDC8AQ8IYD2 350 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 CYP4X1Q8N118 509 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 THAP3Q8WTV1 239 aaPredicted RBP11.66□□□□□ -0.54
CSMD1-205ENST00000519623 MARVELD3Q96A59 401 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 RHBDF1Q96CC6 855 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 TRIM31Q9BZY9 425 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 TRIM45Q9H8W5 580 aaPredicted RBP11.66□□□□□ -0.54
CSMD1-205ENST00000519623 NECTIN3Q9NQS3 549 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 SMYD2Q9NRG4 433 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 ZNF835Q9Y2P0 537 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
CSMD1-205ENST00000519623 TCRBV16S1A1N1A0A5B0 115 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 ARHGAP10A1A4S6 786 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 URADA6NGE7 173 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 EFCAB8A8MWE9 144 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 PRSS44E7EML9 344 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 CCDC188H7C350 402 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 FANCGO15287 622 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 SLC19A2O60779 497 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 PIAS1O75925 651 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 C1GALT1C1LP0DN25 315 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 RNH1P13489 461 aaKnown RBP11.65□□□□□ -0.54
CSMD1-205ENST00000519623 MAOAP21397 527 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 GRNP28799 593 aaKnown RBP11.65□□□□□ -0.54
CSMD1-205ENST00000519623 EEF1DP29692 281 aaKnown RBP11.65□□□□□ -0.54
CSMD1-205ENST00000519623 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
CSMD1-205ENST00000519623 SLC6A12P48065 614 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 HNMTP50135 292 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 MLF1P58340 268 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 TAS2R50P59544 299 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 RBPJQ06330 500 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 TSNQ15631 228 aaKnown RBP11.65□□□□□ -0.54
CSMD1-205ENST00000519623 KRTCAP3Q53RY4 240 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 GALNTL5Q7Z4T8 443 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 MRGPRGQ86SM5 289 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 TMPRSS11BQ86T26 416 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 SIAH3Q8IW03 269 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 CA13Q8N1Q1 262 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 ARMC10Q8N2F6 343 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 ADAMTS18Q8TE60 1221 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 GPR137Q96N19 417 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 RHOJQ9H4E5 214 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 PRDM9Q9NQV7 894 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 LRFN1Q9P244 771 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 CTNNAL1Q9UBT7 734 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 MTO1Q9Y2Z2 717 aaKnown RBP11.65□□□□□ -0.54
CSMD1-205ENST00000519623 SNX24Q9Y343 169 aa11.65□□□□□ -0.54
CSMD1-205ENST00000519623 KLF2Q9Y5W3 355 aaPredicted RBP11.65□□□□□ -0.54
CSMD1-205ENST00000519623 NCOA6Q14686 2063 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 LRIT2A6NDA9 550 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 SAGE2PA6NJ88 616 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 A8MUA0 341 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 CXorf49A8MYA2 514 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 TAPBPO15533 448 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 PRAMEF4O60810 478 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 H2AFYO75367 372 aaKnown RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 TBX6O95947 436 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 GNAZP19086 355 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 TPP2P29144 1249 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 TRHRP34981 398 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 BTN3A2P78410 334 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 MRPS25P82663 173 aaKnown RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 ALDH6A1Q02252 535 aaKnown RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 OC90Q02509 493 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 RUNX2Q13950 521 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 C3AR1Q16581 482 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 TOR1AIP1Q5JTV8 583 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 RNFT1Q5M7Z0 435 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 PRAMEF9Q5VWM5 478 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 Q6ZPB1 254 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 ADAMTSL2Q86TH1 951 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 SPPL2CQ8IUH8 684 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 ZBED8Q8IZ13 594 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 SPATA6LQ8N4H0 392 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 ZNF808Q8N4W9 903 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 HORMAD2Q8N7B1 307 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 TMEM178AQ8NBL3 297 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 VPS39Q96JC1 886 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 FRMD6Q96NE9 622 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 KRT12Q99456 494 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 NAPGQ99747 312 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 EGFL8Q99944 293 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 UNKQ9C0B0 810 aaKnown RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 DERL2Q9GZP9 239 aa11.64□□□□□ -0.55
CSMD1-205ENST00000519623 TSPAN10Q9H1Z9 355 aaPredicted RBP11.64□□□□□ -0.55
CSMD1-205ENST00000519623 RHBGQ9H310 441 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms