RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PLEKHN1Q494U1 663 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 B3GNTL1Q67FW5 361 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 JMJD6Q6NYC1 403 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 TRMT10CQ7L0Y3 403 aaKnown RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 NDUFAF7Q7L592 441 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 UBE3DQ7Z6J8 389 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 ANKRD37Q7Z713 158 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 CA13Q8N1Q1 262 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 TMEM151AQ8N4L1 468 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 TMEM52Q8NDY8 209 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 PHF21BQ96EK2 531 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 PTCD3Q96EY7 689 aaKnown RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 IMMP1LQ96LU5 166 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 NSUN5Q96P11 429 aaKnown RBP12.54□□□□□ -0.4
VEGFA-219ENST00000518824 F2RL3Q96RI0 385 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 ZNF700Q9H0M5 742 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 RHBGQ9H310 441 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 EHD1Q9H4M9 534 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 OPTCQ9UBM4 332 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 IKBKGQ9Y6K9 419 aa12.54□□□□□ -0.4
VEGFA-219ENST00000518824 TENM4Q6N022 2769 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 SHANK1Q9Y566 2161 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 A0A1B0GTL3 188 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 TGFBR3LH3BV60 316 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 GOLGA8RI6L899 631 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 RTCAO00442 366 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 ERI3O43414 337 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 CLEC3AO75596 197 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 KRT38O76015 456 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 FHP07954 510 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 SNRPAP09012 282 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 PRR35P0CG20 571 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 CXCR2P25025 360 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 CASP2P42575 452 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 PIK3CGP48736 1102 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 PLA2G16P53816 162 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 ALDH18A1P54886 795 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 ADPRMQ3LIE5 342 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 ABHD13Q7L211 337 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 GOLGA7Q7Z5G4 137 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 CPEB2Q7Z5Q1 589 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 CCDC91Q7Z6B0 441 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 KRT78Q8N1N4 520 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 SIRT6Q8N6T7 355 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 PTGR2Q8N8N7 351 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 BRIX1Q8TDN6 353 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 ZNF473Q8WTR7 871 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 MZB1Q8WU39 189 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 TBC1D20Q96BZ9 403 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 SCYL1Q96KG9 808 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 SORBS1Q9BX66 1292 aaKnown RBP12.53□□□□□ -0.4
VEGFA-219ENST00000518824 CAPS2Q9BXY5 557 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 MS4A8Q9BY19 250 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 LHPPQ9H008 270 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 NECTIN3Q9NQS3 549 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 PCDHGB7Q9Y5F8 929 aa12.53□□□□□ -0.4
VEGFA-219ENST00000518824 MYOCOSA0A1B0GUC4 107 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 ANKDD1BA6NHY2 528 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 SYCE1LA8MT33 242 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 SAP18O00422 153 aaKnown RBP12.52□□□□□ -0.41
VEGFA-219ENST00000518824 E2F3O00716 465 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PPP6CO00743 305 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 OR7A17O14581 309 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 DPM1O60762 260 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 WISP1O95388 367 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 F10P00742 488 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 TGFB1P01137 390 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PCNAP12004 261 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 MAOAP21397 527 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 CERS1P27544 350 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 EEF1DP29692 281 aaKnown RBP12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PCDH1Q08174 1060 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 GTF2H2Q13888 395 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 ABRAXAS2Q15018 415 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PCBP2Q15366 365 aaKnown RBP eCLIP12.52□□□□□ -0.411e-10■■□□□ 11.4
VEGFA-219ENST00000518824 TBCCQ15814 346 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 GTF2H2CQ6P1K8 395 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 ABHD17CQ6PCB6 329 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 IGFL3Q6UXB1 125 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 ZNF793Q6ZN11 406 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 LINC00696Q6ZRV3 163 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 CUZD1Q86UP6 607 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 LAS2Q8IYD9 372 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PLPP5Q8NEB5 264 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 CATSPER1Q8NEC5 780 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 OR7G3Q8NG95 312 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 GAL3ST3Q96A11 431 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 C19orf60Q96EN9 201 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 CDK15Q96Q40 435 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 CSF3RQ99062 836 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 EFCAB11Q9BUY7 163 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 ZBTB26Q9HCK0 441 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PRDM7Q9NQW5 492 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PLA2G3Q9NZ20 509 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 TMEM216Q9P0N5 145 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 C5AR2Q9P296 337 aa12.52□□□□□ -0.41
VEGFA-219ENST00000518824 PTGFRNQ9P2B2 879 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms