RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SCIMPQ6UWF3 145 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 SERPINA11Q86U17 422 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 OR2T29Q8NH02 315 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 SLC38A4Q969I6 547 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 TESCQ96BS2 214 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 MSANTD3Q96H12 275 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 DSN1Q9H410 356 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 PIF1Q9H611 641 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 LRTM1Q9HBL6 345 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 PLCXD1Q9NUJ7 323 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 NPAP1Q9NZP6 1156 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 CCDC59Q9P031 241 aaKnown RBP17.61■□□□□ 0.41
SDC2-202ENST00000518385 ZNF490Q9ULM2 529 aaPredicted RBP17.61■□□□□ 0.41
SDC2-202ENST00000518385 NDRG4Q9ULP0 352 aaKnown RBP17.61■□□□□ 0.41
SDC2-202ENST00000518385 TSC22D4Q9Y3Q8 395 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 GMPPBQ9Y5P6 360 aa17.61■□□□□ 0.41
SDC2-202ENST00000518385 F5P12259 2224 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 PTGES3LE9PB15 166 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 PRMT3O60678 531 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 ADH1BP00325 375 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 SRFP11831 508 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 IL9P15248 144 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 PTX3P26022 381 aaPredicted RBP17.6■□□□□ 0.41
SDC2-202ENST00000518385 NTSR1P30989 418 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 WASP42768 502 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 GSSP48637 474 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 AGERQ15109 404 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 FAM174BQ3ZCQ3 159 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 ZNF658BQ4V348 819 aaPredicted RBP17.6■□□□□ 0.41
SDC2-202ENST00000518385 RFTN2Q52LD8 501 aaPredicted RBP17.6■□□□□ 0.41
SDC2-202ENST00000518385 PAGE2BQ5JRK9 111 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 LIPJQ5W064 366 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 RAET1GQ6H3X3 334 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 ADAMTSL4Q6UY14 1074 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 PIWIL3Q7Z3Z3 882 aaKnown RBP17.6■□□□□ 0.41
SDC2-202ENST00000518385 B3GNT8Q7Z7M8 397 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 MMAAQ8IVH4 418 aaKnown RBP17.6■□□□□ 0.41
SDC2-202ENST00000518385 ZDHHC21Q8IVQ6 265 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 AMER2Q8N7J2 671 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 DCBLD1Q8N8Z6 715 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 LGALS12Q96DT0 336 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 OR52E6Q96RD3 313 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 SLIRPQ9GZT3 109 aaKnown RBP17.6■□□□□ 0.41
SDC2-202ENST00000518385 RSPH9Q9H1X1 276 aaPredicted RBP17.6■□□□□ 0.41
SDC2-202ENST00000518385 IL1RAPQ9NPH3 570 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 ACOT13Q9NPJ3 140 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 KLQ9UEF7 1012 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 MAPRE3Q9UPY8 281 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 IFT52Q9Y366 437 aa17.6■□□□□ 0.41
SDC2-202ENST00000518385 PNMA8CA0A1B0GUJ8 204 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 E9PQ18 207 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 MMP20O60882 483 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 SERPINA1P01009 418 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 EPORP19235 508 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 P2RY2P41231 377 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 PXNP49023 591 aaPredicted RBP17.59■□□□□ 0.41
SDC2-202ENST00000518385 METAP1P53582 386 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 PRKCDQ05655 676 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.59■□□□□ 0.41
SDC2-202ENST00000518385 RAPSNQ13702 412 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 MAD2L1BPQ15013 274 aaPredicted RBP17.59■□□□□ 0.41
SDC2-202ENST00000518385 PERM1Q5SV97 790 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 KIAA1614Q5VZ46 1190 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 MBOAT1Q6ZNC8 495 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 USP43Q70EL4 1123 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 MSRB3Q8IXL7 192 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 BEND7Q8N7W2 519 aaPredicted RBP17.59■□□□□ 0.41
SDC2-202ENST00000518385 GALNT6Q8NCL4 622 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 KBTBD8Q8NFY9 601 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 SIGLEC11Q96RL6 698 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 GABRG3Q99928 467 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 SLX1AQ9BQ83 275 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 ITPAQ9BY32 194 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 NXF2Q9GZY0 626 aaKnown RBP17.59■□□□□ 0.41
SDC2-202ENST00000518385 KLHL25Q9H0H3 589 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 SLC25A37Q9NYZ2 338 aa17.59■□□□□ 0.41
SDC2-202ENST00000518385 MAGED1Q9Y5V3 778 aaPredicted RBP17.59■□□□□ 0.41
SDC2-202ENST00000518385 OR2A25A4D2G3 310 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 SHISA7A6NL88 538 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 EVPLLA8MZ36 301 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 HOXB9P17482 250 aaPredicted RBP17.58■□□□□ 0.41
SDC2-202ENST00000518385 C5AR1P21730 350 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 TEAD1P28347 426 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 S100A3P33764 101 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 MRPS21P82921 87 aaKnown RBP17.58■□□□□ 0.41
SDC2-202ENST00000518385 TFF2Q03403 129 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 ZNF404Q494X3 552 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 USP39Q53GS9 565 aaKnown RBP17.58■□□□□ 0.41
SDC2-202ENST00000518385 C2orf27AQ580R0 203 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 ZNF648Q5T619 568 aaPredicted RBP17.58■□□□□ 0.41
SDC2-202ENST00000518385 SDE2Q6IQ49 451 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 PNCKQ6P2M8 343 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 FAM86B1Q8N7N1 296 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 IL17RCQ8NAC3 791 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 MCFD2Q8NI22 146 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 HPS1Q92902 700 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 ZHX1-C8orf76Q96EF9 292 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 METTL2AQ96IZ6 378 aaKnown RBP17.58■□□□□ 0.41
SDC2-202ENST00000518385 DPEP2Q9H4A9 486 aa17.58■□□□□ 0.41
SDC2-202ENST00000518385 FBRSQ9HAH7 460 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms