RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PLATP00750 562 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GCP02774 474 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CYBBP04839 570 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 C2P06681 752 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANXA5P08758 320 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FGF2P09038 288 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SPARCP09486 303 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPR89BP0CG08 455 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ERVK-10P10266 1014 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 COX5BP10606 129 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANXA3P12429 323 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 HSD17B1P14061 328 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CD1EP15812 388 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PFKLP17858 780 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TFEBP19484 476 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 C5AR1P21730 350 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PCMT1P22061 227 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ATP5F1P24539 256 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ACADLP28330 430 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GTF2E2P29084 291 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CALCRP30988 508 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RFC2P35250 354 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GRIA1P42261 906 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAGEA2P43356 314 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAGEA6P43360 314 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 KIR3DL2P43630 455 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PIK3CGP48736 1102 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CASP4P49662 377 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARSEP51690 589 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PLK1P53350 603 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PKNOX1P55347 436 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAZP56270 477 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 BCAR1P56945 870 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 STARD6P59095 220 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PSPHP78330 225 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RPP30P78346 268 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 HTRA3P83110 453 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 E2F1Q01094 437 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FOXM1Q08050 763 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PPP3CAQ08209 521 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GAGE1Q13065 139 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPS1Q13098 491 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ILKQ13418 452 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TP53BP2Q13625 1128 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ALKBH1Q13686 389 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAB33AQ14088 237 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 KRT33BQ14525 404 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GRM7Q14831 915 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RTP5Q14D33 572 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SEC23BQ15437 767 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GPR68Q15743 365 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CHRNA6Q15825 494 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CALCRLQ16602 461 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 C21orf62-AS1Q17RA5 79 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PRSS53Q2L4Q9 553 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MAJINQ3KP22 176 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 GXYLT1Q4G148 440 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RNASE10Q5GAN6 216 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 HECTD3Q5T447 861 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 HACD4Q5VWC8 232 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM46CQ5VWP2 391 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 LIPNQ5VXI9 398 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 B3GNTL1Q67FW5 361 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RAP1GAP2Q684P5 730 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SEL1L3Q68CR1 1132 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MBLAC2Q68D91 279 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 KDM4DQ6B0I6 523 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 LCN8Q6JVE9 175 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MSANTD2Q6P1R3 559 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ARHGAP11AQ6P4F7 1023 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 DARS2Q6PI48 645 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 METAP1DQ6UB28 335 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 LMBR1LQ6UX01 489 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SCARA5Q6ZMJ2 495 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TMPRSS11AQ6ZMR5 421 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 FAM183BPQ6ZVS7 135 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 TRILQ7L0X0 811 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SMIM15Q7Z3B0 74 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 IQCHQ86VS3 1027 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZC3HC1Q86WB0 502 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PSTKQ8IV42 348 aaKnown RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 NAXDQ8IW45 347 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PDZD9Q8IXQ8 264 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 KATNAL2Q8IYT4 538 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADGRG2Q8IZP9 1017 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CENPLQ8N0S6 344 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 SVBPQ8N300 66 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MINDY1Q8N5J2 469 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 C4orf32Q8N8J7 132 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ANKRD52Q8NB46 1076 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 MFSD9Q8NBP5 474 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 KIAA0895Q8NCT3 520 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ADPRHL1Q8NDY3 354 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 AGBL3Q8NEM8 1001 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 DMBX1Q8NFW5 382 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 PLBD2Q8NHP8 589 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 ZNF564Q8TBZ8 553 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 RDH11Q8TC12 318 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 HTR3CQ8WXA8 447 aa4.63□□□□□ -1.67
HMGB1P19-201ENST00000517578 CPA5Q8WXQ8 436 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms