RNA–Protein interactions for RNA: ENST00000516348.1

RNU6-479P-201, Transcript of RNA, U6 small nuclear 479, pseudogene, humanhuman

BASIC

Gene RNU6-479P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-479P-201ENST00000516348 IFIT1P09914 478 aaKnown RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 SKILP12757 684 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ACTN1P12814 892 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ARL1P40616 181 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ZNF131P52739 623 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 HERVK_113P61574 105 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ORC2Q13416 577 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 PCGF3Q3KNV8 242 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 KRTAP21-3Q3LHN1 58 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 KRTAP20-2Q3LI61 65 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 JADE1Q6IE81 842 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 CYP20A1Q6UW02 462 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 DET1Q7L5Y6 550 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 CPOQ8IVL8 374 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 DND1Q8IYX4 353 aaKnown RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 DCAF4L2Q8NA75 395 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 UBXN10Q96LJ8 280 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 FOPNLQ96NB1 174 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 KLHL5Q96PQ7 755 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ALKBH3Q96Q83 286 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 CDCA3Q99618 268 aaPredicted RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ELAC2Q9BQ52 826 aaKnown RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 GPR63Q9BZJ6 419 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ZMYND12Q9H0C1 365 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 SMC4Q9NTJ3 1288 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 SLC12A6Q9UHW9 1150 aa-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 MYH14Q7Z406 1995 aaKnown RBP-0.36□□□□□ -2.47
RNU6-479P-201ENST00000516348 ZNF407Q9C0G0 2248 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 IGLV2-33A0A075B6J2 118 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 FEZF1A0PJY2 475 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 FBP2O00757 339 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 SERF1AO75920 110 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 C6orf47O95873 294 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 HPNP05981 417 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 PRLRP16471 622 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 KIR2DS4P43632 304 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 MNAT1P51948 309 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 PEX3P56589 373 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 MEF2CQ06413 473 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 PRKG2Q13237 762 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 ASAH1Q13510 395 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 TRIM14Q14142 442 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 TAF9Q16594 264 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 PPP1R3AQ16821 1122 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 ARID3BQ8IVW6 561 aaPredicted RBP-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 ZNF671Q8TAW3 534 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 SLC22A8Q8TCC7 542 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 CASP10Q92851 521 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 LZTS2Q9BRK4 669 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 PAPOLGQ9BWT3 736 aaKnown RBP-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 KRTAP2-1Q9BYU5 128 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 ULBP2Q9BZM5 246 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 DGKBQ9Y6T7 804 aa-0.37□□□□□ -2.47
RNU6-479P-201ENST00000516348 KDM3AQ9Y4C1 1321 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 A0A1W2PR77 199 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 ANKUB1A6NFN9 424 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 SPRY1O43609 319 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 FRAT2O75474 233 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 KRTAP2-3P0C7H8 128 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 OR2T7P0C7T2 308 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 IGFBP3P17936 291 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 ALDH3B1P43353 468 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 LIG4P49917 911 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 VAMP7P51809 220 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 UNC119Q13432 240 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 KRT32Q14532 448 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 ZNF630Q2M218 657 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 QRICH1Q2TAL8 776 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 ZNF311Q5JNZ3 666 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 OR4A47Q6IF82 309 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 IL17RELQ6ZVW7 336 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 NME8Q8N427 588 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 CARNMT1Q8N4J0 409 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 OR4K1Q8NGD4 311 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 POF1BQ8WVV4 589 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 MARC2Q969Z3 335 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 ANKRD27Q96NW4 1050 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 OR2A14Q96R47 310 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 SPIN2AQ99865 258 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 SPIN2BQ9BPZ2 258 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 KRTAP2-4Q9BYR9 128 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 TNMDQ9H2S6 317 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 PLK3Q9H4B4 646 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 ITM2CQ9NQX7 267 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 NENFQ9UMX5 172 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 RNF24Q9Y225 148 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 NAV2Q8IVL1 2488 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 MTCL1Q9Y4B5 1905 aaKnown RBP-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 COL5A3P25940 1745 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 RNF123Q5XPI4 1314 aa-0.38□□□□□ -2.47
RNU6-479P-201ENST00000516348 TMEM221A6NGB7 291 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 FAM166BA8MTA8 275 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 SEC14L2O76054 403 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 F9P00740 461 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 PAFAH1B1P43034 410 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 RPS27AP62979 156 aaKnown RBP-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 NIPAL4Q0D2K0 466 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 MADCAM1Q13477 382 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 KRT33BQ14525 404 aa-0.39□□□□□ -2.47
RNU6-479P-201ENST00000516348 C6orf136Q5SQH8 315 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms