RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 IGFL2Q6UWQ7 119 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 KBTBD2Q8IY47 623 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 LAS2Q8IYD9 372 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 SRFBP1Q8NEF9 429 aaKnown RBP12.06□□□□□ -0.48
CLCN3-210ENST00000515420 ADAMTS18Q8TE60 1221 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 PNPLA2Q96AD5 504 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 TBC1D20Q96BZ9 403 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 C8orf44Q96CB5 159 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 AGAP4Q96P64 663 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 NPLQ9BXD5 320 aaPredicted RBP12.06□□□□□ -0.48
CLCN3-210ENST00000515420 PPCSQ9HAB8 311 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 LANCL2Q9NS86 450 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 ADGRE2Q9UHX3 823 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 TSC22D4Q9Y3Q8 395 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 ASB1Q9Y576 335 aa12.06□□□□□ -0.48
CLCN3-210ENST00000515420 CNTRLQ7Z7A1 2325 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 SYNDIG1LA6NDD5 238 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF860A6NHJ4 632 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 MAGEB17A8MXT2 336 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 STX16-NPEPL1H3BU86 382 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 STX16O14662 325 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 ERI3O43414 337 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 CHST10O43529 356 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 JRKO75564 520 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 SERPINA7P05543 415 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 FAM153BP0C7A2 387 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PRR35P0CG20 571 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 RNH1P13489 461 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 GCAP28676 217 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 HNRNPH1P31943 449 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 HNF4AP41235 474 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 EFNA3P52797 238 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 RHAGQ02094 409 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 EEF1A2Q05639 463 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 TGM3Q08188 693 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 Q0VFX4 171 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 RAPSNQ13702 412 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 SLC29A2Q14542 456 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PCOLCEQ15113 449 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PFKFB4Q16877 469 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 FAM153CQ494X1 144 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 MFSD4BQ5TF39 518 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 LIPJQ5W064 366 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 GRHL2Q6ISB3 625 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 JMJD6Q6NYC1 403 aaPredicted RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 QSOX2Q6ZRP7 698 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 CPEB2Q7Z5Q1 589 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PLD6Q8N2A8 252 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 ZADH2Q8N4Q0 377 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 RBMXL3Q8N7X1 1067 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 LRRN4CLQ8ND94 238 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 OR2L5Q8NG80 312 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 UHMK1Q8TAS1 419 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PPP4R1Q8TF05 950 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 MS4A6EQ96DS6 147 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PEX11GQ96HA9 241 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 THOC3Q96J01 351 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 FAR2Q96K12 515 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 IMMP1LQ96LU5 166 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 MRPL57Q9BQC6 102 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 CCDC77Q9BR77 488 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 REXO4Q9GZR2 422 aaKnown RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 AICDAQ9GZX7 198 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 EPS8L2Q9H6S3 715 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF160Q9HCG1 818 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 PSMC3IPQ9P2W1 217 aaPredicted RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF490Q9ULM2 529 aaPredicted RBP12.05□□□□□ -0.48
CLCN3-210ENST00000515420 ANGPTL3Q9Y5C1 460 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 CPAMD8Q8IZJ3 1885 aa12.05□□□□□ -0.48
CLCN3-210ENST00000515420 IQANK1A0A1B0GTG1 560 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 C4orf51C9J302 202 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 MASP2O00187 686 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 PSMD12O00232 456 aaPredicted RBP12.04□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF500O60304 480 aaPredicted RBP12.04□□□□□ -0.48
CLCN3-210ENST00000515420 WISP1O95388 367 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 TBX6O95947 436 aaPredicted RBP12.04□□□□□ -0.48
CLCN3-210ENST00000515420 ARFIP1P53367 373 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 RAB8AP61006 207 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 ABRAXAS2Q15018 415 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 NADK2Q4G0N4 442 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 CRB2Q5IJ48 1285 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 TEX35Q5T0J7 233 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 SLC6A19Q695T7 634 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 PLAG1Q6DJT9 500 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 FAAH2Q6GMR7 532 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 MED27Q6P2C8 311 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 TRIM40Q6P9F5 258 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 VN1R5Q7Z5H4 357 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 ANKRD37Q7Z713 158 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 TEX9Q8N6V9 391 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 OR5T3Q8NGG3 340 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 ACMSDQ8TDX5 336 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 ZNF473Q8WTR7 871 aaKnown RBP12.04□□□□□ -0.48
CLCN3-210ENST00000515420 CCT6BQ92526 530 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 LMF1Q96S06 567 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 MESP1Q9BRJ9 268 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 ROGDIQ9GZN7 287 aa12.04□□□□□ -0.48
CLCN3-210ENST00000515420 MRPL46Q9H2W6 279 aaKnown RBP12.04□□□□□ -0.48
CLCN3-210ENST00000515420 EPB41L4BQ9H329 900 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms