RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CD93Q9NPY3 652 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 NLE1Q9NVX2 485 aaPredicted RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 LYARQ9NX58 379 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 TAS2R16Q9NYV7 291 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 TRPS1Q9UHF7 1281 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 KIF25Q9UIL4 384 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 ARL5AQ9Y689 179 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 CLCA3PQ9Y6N3 262 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 CDH10Q9Y6N8 788 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 FZD9O00144 591 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 CLIC1O00299 241 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 QSOX1O00391 747 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 SCAMP3O14828 347 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 KHNYNO15037 678 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PAGE1O75459 146 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PRAMEF1O95521 474 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 VTNP04004 478 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 OR56A5P0C7T3 313 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 TXNP10599 105 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 MAPK1P28482 360 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 KCNJ10P78508 379 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 EIF4EBP2Q13542 120 aaPredicted RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PTPRNQ16849 979 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PDE12Q6L8Q7 609 aaKnown RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF551Q7Z340 670 aaPredicted RBP12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PHC2Q8IXK0 858 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 UMODL1-AS1Q8N2C9 162 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 ATP6V1C2Q8NEY4 427 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 PROKR2Q8NFJ6 384 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 CLHC1Q8NHS4 586 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 FANK1Q8TC84 345 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 TRPM4Q8TD43 1214 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 B3GALT6Q96L58 329 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 KCNJ15Q99712 375 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 CD244Q9BZW8 370 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 ZNF408Q9H9D4 720 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 EMC3Q9P0I2 261 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 ACSL5Q9ULC5 683 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 SESN1Q9Y6P5 492 aa12.34□□□□□ -0.43
SMAD1-215ENST00000515385 C2orf81A6NN90 581 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 A8MUA0 341 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 IRAK2O43187 625 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 CHP2O43745 196 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 TPST2O60704 377 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ARIH2O95376 493 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ANXA3P12429 323 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 TPMTP51580 245 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 CLCN4P51793 760 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 CLCNKAP51800 687 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 DUOXA1Q1HG43 343 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 PTCHD4Q6ZW05 846 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 GPRIN1Q7Z2K8 1008 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 RASGRP3Q8IV61 690 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 PM20D2Q8IYS1 436 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 IL17RCQ8NAC3 791 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 PLA2G15Q8NCC3 412 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ZBTB44Q8NCP5 570 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 C7orf57Q8NEG2 295 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 OR4C15Q8NGM1 316 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 OR13C4Q8NGS5 318 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ARRDC2Q8TBH0 407 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 TMEM163Q8TC26 289 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 EEF1AKMT1Q8WVE0 214 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ST8SIA4Q92187 359 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 FCRL2Q96LA5 508 aaPredicted RBP12.33□□□□□ -0.44
SMAD1-215ENST00000515385 OSMRQ99650 979 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 DOHHQ9BU89 302 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 SLC29A3Q9BZD2 475 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 FZD3Q9NPG1 666 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 TXNL4BQ9NX01 149 aaKnown RBP12.33□□□□□ -0.44
SMAD1-215ENST00000515385 ZMYM5Q9UJ78 669 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 TRAV19A0A0A6YYK7 116 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 HHLA1C9JL84 531 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 HRO43593 1189 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 CSO75390 466 aaKnown RBP12.33□□□□□ -0.44
SMAD1-215ENST00000515385 AP2A2O94973 939 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 DHFRP00374 187 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 HLA-EP13747 358 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 HOXB3P14651 431 aaPredicted RBP12.33□□□□□ -0.44
SMAD1-215ENST00000515385 KCNE1P15382 129 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 BMP8BP34820 402 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 SOX3P41225 446 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 BAG6P46379 1132 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 MAXP61244 160 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 CACNB2Q08289 660 aaPredicted RBP12.33□□□□□ -0.44
SMAD1-215ENST00000515385 EXOSC2Q13868 293 aaKnown RBP12.33□□□□□ -0.44
SMAD1-215ENST00000515385 HSD17B12Q53GQ0 312 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 BMP8AQ7Z5Y6 402 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 PTOV1Q86YD1 416 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 RGL4Q8IZJ4 473 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 TMEM145Q8NBT3 493 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 OR4A15Q8NGL6 344 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 CD200R1Q8TD46 325 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 KCNJ9Q92806 393 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 PTP4A1Q93096 173 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 UCN3Q969E3 161 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 PHF21AQ96BD5 680 aa12.33□□□□□ -0.44
SMAD1-215ENST00000515385 TPD52L3Q96J77 140 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms