RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FAM47BQ8NA70 645 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 PSMG2Q969U7 264 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 CPNE4Q96A23 557 aaPredicted RBP7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 ARMC5Q96C12 935 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 CRELD1Q96HD1 420 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 MED18Q9BUE0 208 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 HDHD5Q9BXW7 423 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 TRIM2Q9C040 744 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 NT5MQ9NPB1 228 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 RNF186Q9NXI6 227 aa7.22□□□□□ -1.25
PDLIM5-219ENST00000514743 LAMA2P24043 3122 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 METTL21EPA6NDL7 271 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 ANKDD1BA6NHY2 528 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 OR6C70A6NIJ9 312 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 CBR3O75828 277 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 MAT2AP31153 395 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 NUDT2P50583 147 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 ACLYP53396 1101 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 KCNK10P57789 538 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 POU4F1Q01851 419 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 PRKAA1Q13131 559 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 KRR1Q13601 381 aaKnown RBP7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 ALG11Q2TAA5 492 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 ACER2Q5QJU3 275 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 TCEAL6Q6IPX3 200 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 FBXL22Q6P050 247 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 TMEM207Q6UWW9 146 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 GALNTL5Q7Z4T8 443 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 CIR1Q86X95 450 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 ADGRG3Q86Y34 549 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 FBXW8Q8N3Y1 598 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 OR5T2Q8NGG2 359 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 OR6M1Q8NGM8 313 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 HMGCLL1Q8TB92 370 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 ELMO2Q96JJ3 720 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 DPYSL5Q9BPU6 564 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 DUSP26Q9BV47 211 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 COPS7BQ9H9Q2 264 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 RANGRFQ9HD47 186 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 TREM1Q9NP99 234 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 SLC22A11Q9NSA0 550 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 PRG3Q9Y2Y8 225 aaPredicted RBP7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 AUP1Q9Y679 476 aa7.21□□□□□ -1.25
PDLIM5-219ENST00000514743 SCN8AQ9UQD0 1980 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 A0A087X1B8 175 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 TMEM210A6NLX4 147 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 DRGXA6NNA5 263 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 NEDD8-MDP1E9PL57 170 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 AKR7A2O43488 359 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 NPHS1O60500 1241 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 DPP6P42658 865 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 DNAJB13P59910 316 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 TIAL1Q01085 375 aaKnown RBP eCLIP7.21□□□□□ -1.264e-8■■■■□ 22.5
PDLIM5-219ENST00000514743 EFEMP1Q12805 493 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 GPNMBQ14956 572 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 SIRPB2Q5JXA9 342 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 NADSYN1Q6IA69 706 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 SCIMPQ6UWF3 145 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 GLB1LQ6UWU2 654 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 CARM1Q86X55 608 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 HIPK1Q86Z02 1210 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 CILP2Q8IUL8 1156 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 GPR65Q8IYL9 337 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 UBQLNLQ8IYU4 475 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 PELI3Q8N2H9 469 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 ZNF511Q8NB15 262 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 FAM156AQ8NDB6 213 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 CPEB3Q8NE35 698 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 BIRC7Q96CA5 298 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 UBXN10Q96LJ8 280 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 FYTTD1Q96QD9 318 aaKnown RBP7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 FBXO44Q9H4M3 255 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 NUDT15Q9NV35 164 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 MARCH5Q9NX47 278 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 ZIM2Q9NZV7 527 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 AKAP7Q9P0M2 348 aaPredicted RBP7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 HCSTQ9UBK5 93 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 RNF24Q9Y225 148 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 DLGAP4Q9Y2H0 992 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 KIAA1671Q9BY89 1806 aa7.21□□□□□ -1.26
PDLIM5-219ENST00000514743 LOC285095A0A1B0GVY8 99 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 A8MXE2 369 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 CCL22O00626 93 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 LDB2O43679 373 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 TLL1O43897 1013 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PAPSS2O95340 614 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 JUNDP17535 347 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ZP3P21754 424 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 GNPDA1P46926 289 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 SERPINB10P48595 397 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 POU4F3Q15319 338 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 RAP1GAP2Q684P5 730 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 C17orf107Q6ZR85 190 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 KCTD8Q6ZWB6 473 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PTAR1Q7Z6K3 402 aaPredicted RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 BPIFB6Q8NFQ5 453 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 ROBO4Q8WZ75 1007 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 RBPMSQ93062 196 aaKnown RBP7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 PTERQ96BW5 349 aa7.2□□□□□ -1.26
PDLIM5-219ENST00000514743 MRPL57Q9BQC6 102 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms