RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 SYNPOQ8N3V7 929 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 CBR4Q8N4T8 237 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 SLC47A1Q96FL8 570 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 QRFPRQ96P65 431 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 BDH2Q9BUT1 245 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 LHX9Q9NQ69 397 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 AASDHPPTQ9NRN7 309 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 SPHK1Q9NYA1 384 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 DUSP12Q9UNI6 340 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 CYP8B1Q9UNU6 501 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 DMTF1Q9Y222 760 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 PRUNE2Q8WUY3 3088 aa14.28□□□□□ -0.12
VCAN-211ENST00000513984 TDRD6O60522 2096 aaKnown RBP14.27□□□□□ -0.12
VCAN-211ENST00000513984 CLOCKO15516 846 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 DEAF1O75398 565 aaPredicted RBP14.27□□□□□ -0.12
VCAN-211ENST00000513984 RASAL1O95294 804 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 MT-ND1P03886 318 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 F3P13726 295 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 GRK3P35626 688 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 MAPK12P53778 367 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 HBA1P69905 142 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 ZCCHC8Q6NZY4 707 aaKnown RBP14.27□□□□□ -0.12
VCAN-211ENST00000513984 SLC30A9Q6PML9 568 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 AMIGO1Q86WK6 493 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 NUDT13Q86X67 352 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 NRROSQ86YC3 692 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 ADGRF3Q8IZF5 1079 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 EID3Q8N140 333 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 OR13H1Q8NG92 308 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 RGMAQ96B86 450 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 TOE1Q96GM8 510 aaKnown RBP14.27□□□□□ -0.12
VCAN-211ENST00000513984 TWSG1Q9GZX9 223 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 SPASTQ9UBP0 616 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 KLF15Q9UIH9 416 aa14.27□□□□□ -0.12
VCAN-211ENST00000513984 A6NHS1 94 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 PDLIM1O00151 329 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 RTCAO00442 366 aaKnown RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 SMNDC1O75940 238 aaKnown RBP eCLIP14.27□□□□□ -0.13
VCAN-211ENST00000513984 PRKD3O94806 890 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 C6orf47O95873 294 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 SERPINA1P01009 418 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 CHRM5P08912 532 aaPredicted RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 DDCP20711 480 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 CMPK1P30085 196 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 AHRP35869 848 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 BCL6P41182 706 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 CHN2P52757 468 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 LRRC32Q14392 662 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 SKIV2LQ15477 1246 aaKnown RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 ZIC1Q15915 447 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 ADRM1Q16186 407 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 PRSS53Q2L4Q9 553 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 ZNF425Q6IV72 752 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 UBE3DQ7Z6J8 389 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 PLD3Q8IV08 490 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 CHERPQ8IWX8 916 aaKnown RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 SLC22A18ASQ8N1D0 253 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 FBXL6Q8N531 539 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 FAM47BQ8NA70 645 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 LCN9Q8WX39 176 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 CIDECQ96AQ7 238 aaPredicted RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 TM4SF18Q96CE8 201 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 ZNF764Q96H86 408 aaPredicted RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 DPH7Q9BTV6 452 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 DDX31Q9H8H2 851 aaKnown RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 NTN4Q9HB63 628 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 MIEF1Q9NQG6 463 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 GPR27Q9NS67 375 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 WSB2Q9NYS7 404 aaPredicted RBP14.27□□□□□ -0.13
VCAN-211ENST00000513984 UBAP1Q9NZ09 502 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 DLGAP2Q9P1A6 1054 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 TAAR2Q9P1P5 351 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 PCDHGB4Q9UN71 923 aa14.27□□□□□ -0.13
VCAN-211ENST00000513984 UPK1AO00322 258 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 DLGAP1O14490 977 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 HAT1O14929 419 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 NUDT1P36639 197 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 SLC19A1P41440 591 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 CLCN2P51788 898 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 TXNL4AP83876 142 aaKnown RBP14.26□□□□□ -0.13
VCAN-211ENST00000513984 VEZF1Q14119 521 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 RGNQ15493 299 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 ADPRMQ3LIE5 342 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 TMEM35AQ53FP2 167 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 NHSL2Q5HYW2 709 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 FKBP9P1Q75LS8 142 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 FAM20CQ8IXL6 584 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 TRIML2Q8N7C3 387 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 PNPT1Q8TCS8 783 aaKnown RBP14.26□□□□□ -0.13
VCAN-211ENST00000513984 SLC6A16Q9GZN6 736 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 AICDAQ9GZX7 198 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 SAMD4AQ9UPU9 718 aaKnown RBP14.26□□□□□ -0.13
VCAN-211ENST00000513984 AP1M2Q9Y6Q5 423 aa14.26□□□□□ -0.13
VCAN-211ENST00000513984 RNF103-CHMP3A0A140T963 221 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 LRIT2A6NDA9 550 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 CD6P30203 668 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 ARFIP1P53367 373 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 MVDP53602 400 aa14.25□□□□□ -0.13
VCAN-211ENST00000513984 TRA2BP62995 288 aaKnown RBP14.25□□□□□ -0.13
VCAN-211ENST00000513984 ILF3Q12906 894 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms