RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 A0A1W2PPB8 328 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 A0A1W2PRS3 328 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 KIR3DP1A8MWS1 328 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 GFYI3L273 518 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 SLC16A5O15375 505 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 LCMT2O60294 686 aaKnown RBP10.17□□□□□ -0.78
DDX41-216ENST00000513562 SYF2O95926 243 aaKnown RBP10.17□□□□□ -0.78
DDX41-216ENST00000513562 TPM1P09493 284 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 CD53P19397 219 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 MAOAP21397 527 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 TACR1P25103 407 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 ARNTP27540 789 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 FDFT1P37268 417 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 MAGEA5P43359 124 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 SSR4P51571 173 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 CLCN2P51788 898 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 CLCN7P51798 805 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 TBPL1P62380 186 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 SKP1P63208 163 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 OLR1P78380 273 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 NKX6-1P78426 367 aaPredicted RBP10.17□□□□□ -0.78
DDX41-216ENST00000513562 BTG2P78543 158 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 GTF3C1Q12789 2109 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 PCBP2Q15366 365 aaKnown RBP eCLIP10.17□□□□□ -0.78
DDX41-216ENST00000513562 TERF2Q15554 542 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 FBXL19-AS1Q494R0 122 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 MRNIPQ6NTE8 343 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 FAM109AQ8N4B1 249 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 OTUD6BQ8N6M0 293 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 MFSD9Q8NBP5 474 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 RELL2Q8NC24 303 aaPredicted RBP10.17□□□□□ -0.78
DDX41-216ENST00000513562 B3GNT7Q8NFL0 401 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 RNASE6Q93091 150 aaKnown RBP10.17□□□□□ -0.78
DDX41-216ENST00000513562 PCBD2Q9H0N5 130 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 FBXW2Q9UKT8 454 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 PPIEQ9UNP9 301 aaKnown RBP10.17□□□□□ -0.78
DDX41-216ENST00000513562 ERVK-11Q9UQG0 969 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 SH2B3Q9UQQ2 575 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 YARS2Q9Y2Z4 477 aaKnown RBP10.17□□□□□ -0.78
DDX41-216ENST00000513562 SCN2AQ99250 2005 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 COL6A5A8TX70 2615 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 A8MVJ9 347 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 E7EVH7 732 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 SUSD5O60279 629 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 MYO1DO94832 1006 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 GOSR1O95249 250 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 B3GALT4O96024 378 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 ALOX12P18054 663 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 NMBRP28336 390 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 ASCL1P50553 236 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 CRADDP78560 199 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 TTLL9Q3SXZ7 439 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 DEFB134Q4QY38 66 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 WLSQ5T9L3 541 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 FBXW10Q5XX13 1052 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 NIPAL1Q6NVV3 410 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
DDX41-216ENST00000513562 GK5Q6ZS86 529 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 TMEM251Q8N6I4 163 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 GIMAP7Q8NHV1 300 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 VMP1Q96GC9 406 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 TCF12Q99081 682 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 SLC30A3Q99726 388 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 CNPPD1Q9BV87 410 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 IL1RL2Q9HB29 575 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 NECTIN3Q9NQS3 549 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 HPF1Q9NWY4 346 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 ACAD8Q9UKU7 415 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 CRYL1Q9Y2S2 319 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 CSPG4Q6UVK1 2322 aa10.16□□□□□ -0.78
DDX41-216ENST00000513562 HSPB2A8KAH6 182 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 A8MUA0 341 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 E5RI56 91 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 G3V3Y1 287 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 DVL2O14641 736 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 PFDN6O15212 129 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 NDUFS4O43181 175 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 ZBTB14O43829 449 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 CEP104O60308 925 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 OR2J2O76002 312 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 OR6B1O95007 311 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 VAPBO95292 243 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 PTMAP06454 111 aaKnown RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 APRTP07741 180 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 CELA3AP09093 270 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 MPC1LP0DKB6 136 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 EPXP11678 715 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 GABRA1P14867 456 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 ENDOUP21128 410 aaKnown RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 STIP1P31948 543 aaKnown RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 GRK3P35626 688 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 MAN2A2P49641 1150 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 GPR143P51810 404 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 SESN2P58004 480 aaPredicted RBP10.15□□□□□ -0.78
DDX41-216ENST00000513562 HYAL2Q12891 473 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 PWP1Q13610 501 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 HSPB2Q16082 182 aa10.15□□□□□ -0.78
DDX41-216ENST00000513562 HYAL4Q2M3T9 481 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms