RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 KLF13Q9Y2Y9 288 aaPredicted RBP11.79□□□□□ -0.52
VEGFA-216ENST00000512683 TEX264Q9Y6I9 313 aa11.79□□□□□ -0.52
VEGFA-216ENST00000512683 CROCCQ5TZA2 2017 aa11.79□□□□□ -0.52
VEGFA-216ENST00000512683 CCDC168Q8NDH2 2452 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 FEZF1A0PJY2 475 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 OR1F1O43749 312 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 CDH1P12830 882 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 ZNF24P17028 368 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 SCTRP47872 440 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 ILF2Q12905 390 aaKnown RBP11.78□□□□□ -0.52
VEGFA-216ENST00000512683 CSHL1Q14406 222 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 PHKG1Q16816 387 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 STEAP4Q687X5 459 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 MBOAT1Q6ZNC8 495 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 PDIK1LQ8N165 341 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 ZNF740Q8NDX6 193 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 C16orf52Q8NHV5 167 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 AGAP11Q8TF27 550 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 CHTF18Q8WVB6 975 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 ASB5Q8WWX0 329 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 SEC16BQ96JE7 1060 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 PTCHD1Q96NR3 888 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 DMRTA2Q96SC8 542 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 MACROD1Q9BQ69 325 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 DEFB126Q9BYW3 111 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 SLC24A3Q9HC58 644 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 ARL15Q9NXU5 204 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 SH3BGRL2Q9UJC5 107 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 PPIEQ9UNP9 301 aaKnown RBP11.78□□□□□ -0.52
VEGFA-216ENST00000512683 CHMP2BQ9UQN3 213 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 SH2B3Q9UQQ2 575 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 VWA7Q9Y334 891 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 MMACHCQ9Y4U1 282 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 SAR1BQ9Y6B6 198 aa11.78□□□□□ -0.52
VEGFA-216ENST00000512683 TCRBV16S1A1N1A0A5B0 115 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 OR2W5A6NFC9 320 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 SAGE2PA6NJ88 616 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 FOXO6A8MYZ6 492 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 PSMD12O00232 456 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 NDUFS4O43181 175 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 WISP2O76076 250 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 SEC31AO94979 1220 aaKnown RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 SERPINA6P08185 405 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 SMIM10L1P0DMW3 83 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 RNH1P13489 461 aaKnown RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 GSTM2P28161 218 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 HPDP32754 393 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 PTGS2P35354 604 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 KIR3DL1P43629 444 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 ITGA8P53708 1063 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 DEFB134Q4QY38 66 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 PAOXQ6QHF9 649 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 SPNS3Q6ZMD2 512 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 RGS9BPQ6ZS82 235 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 GPALPP1Q8IXQ4 340 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 NFAM1Q8NET5 270 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 ZCCHC10Q8TBK6 192 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 UTP15Q8TED0 518 aaKnown RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 CA5BP1Q8WTZ4 195 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 SLC5A11Q8WWX8 675 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 LRRC39Q96DD0 335 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 LINGO1Q96FE5 620 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 SMIM10Q96HG1 83 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 NAPGQ99747 312 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 AIF1LQ9BQI0 150 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 NPLQ9BXD5 320 aaPredicted RBP11.77□□□□□ -0.53
VEGFA-216ENST00000512683 PELI2Q9HAT8 420 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 MCCC2Q9HCC0 563 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 ANKRD10Q9NXR5 420 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 ASB1Q9Y576 335 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 KCNE2Q9Y6J6 123 aa11.77□□□□□ -0.53
VEGFA-216ENST00000512683 PKDREJQ9NTG1 2253 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 IGKV3D-11A0A0A0MRZ8 115 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CCDC188H7C350 402 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CLDN4O14493 209 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 ADAM10O14672 748 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 MAN1A2O60476 641 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CDC123O75794 336 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 STATHP02808 62 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 TPP2P29144 1249 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CLCN2P51788 898 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CBLBQ13191 982 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 FRG1Q14331 258 aaKnown RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 FASTKD3Q14CZ7 662 aaKnown RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 HECTD2Q5U5R9 776 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CEP97Q8IW35 865 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CHERPQ8IWX8 916 aaKnown RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 SHISA5Q8N114 240 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 ZFP62Q8NB50 900 aaPredicted RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 TTLQ8NG68 377 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 OR5T3Q8NGG3 340 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 FAM57AQ8TBR7 257 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 TSLPQ969D9 159 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 ALKBH8Q96BT7 664 aaKnown RBP11.76□□□□□ -0.53
VEGFA-216ENST00000512683 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 CAPS2Q9BXY5 557 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 HES7Q9BYE0 225 aa11.76□□□□□ -0.53
VEGFA-216ENST00000512683 SLC6A16Q9GZN6 736 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms