RNA–Protein interactions for RNA: ENST00000512487.1

LINC00290-201, long intergenic non-protein coding RNA 290, humanhuman

TSL 1 (best) BASIC

Gene LINC00290, Length 593 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00290-201ENST00000512487 CLDN4O14493 209 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 RRP8O43159 456 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 ERI3O43414 337 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 KIAA0754O94854 1291 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 SCELO95171 688 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 PDYNP01213 254 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 CD22P20273 847 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 FBLP22087 321 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 SLC5A2P31639 672 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 RPL3P39023 403 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 BUD31P41223 144 aaPredicted RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 SSR2P43308 183 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 OCRLQ01968 901 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 DDX39BQ13838 428 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 TOR1AIP1Q5JTV8 583 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 OR4C11Q6IEV9 310 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 ABHD17CQ6PCB6 329 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 CYP20A1Q6UW02 462 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 ZCCHC23Q6ZST2 131 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 TTLL10Q6ZVT0 673 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 MED25Q71SY5 747 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 PLD3Q8IV08 490 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 DDIASQ8IXT1 998 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 DSELQ8IZU8 1212 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 OR4N4Q8N0Y3 316 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 NATD1Q8N6N6 113 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 ZNF248Q8NDW4 579 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 ZNF740Q8NDX6 193 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 UTP15Q8TED0 518 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 TWIST2Q8WVJ9 160 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 COL26A1Q96A83 441 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 CDK15Q96Q40 435 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 MTERF1Q99551 399 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 FAIM2Q9BWQ8 316 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 TRIM55Q9BYV6 548 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 SLC26A1Q9H2B4 701 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 CCDC86Q9H6F5 360 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 DDX31Q9H8H2 851 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 MLXIPLQ9NP71 852 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 RYDENQ9NUL5 291 aaKnown RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 C1orf109Q9NX04 203 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 IFT80Q9P2H3 777 aaPredicted RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 ZNF282Q9UDV7 671 aaPredicted RBP11.29□□□□□ -0.6
LINC00290-201ENST00000512487 SLC12A4Q9UP95 1085 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 SH2B3Q9UQQ2 575 aa11.29□□□□□ -0.6
LINC00290-201ENST00000512487 FAM149AA5PLN7 773 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 SRRM3A6NNA2 597 aaPredicted RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 MAGEB17A8MXT2 336 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 C9orf172C9J069 976 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 UBFD1O14562 309 aaKnown RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 FFAR3O14843 346 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 GPR42O15529 346 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 GALR3O60755 368 aaPredicted RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 PRAMEF4O60810 478 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 DLGAP3O95886 979 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 TGFB1P01137 390 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 SMIM10L1P0DMW3 83 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 RNH1P13489 461 aaKnown RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 TSPAN8P19075 237 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 ITIH1P19827 911 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 HIST1H1TP22492 207 aaPredicted RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 ASMTP46597 345 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 GCGRP47871 477 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 UCNP55089 124 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 RPS13P62277 151 aaKnown RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 AP2B1P63010 937 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 DEFB110Q30KQ9 67 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 NKAIN1Q4KMZ8 207 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 SPDYAQ5MJ70 313 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 ARHGAP40Q5TG30 622 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 PRAMEF9Q5VWM5 478 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 GALNT18Q6P9A2 607 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 ACAD11Q709F0 780 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 OVCH1Q7RTY7 1134 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 SPNS2Q8IVW8 549 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 METTL4Q8N3J2 472 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 IL22RA1Q8N6P7 574 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 ZSCAN1Q8NBB4 408 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 C19orf60Q96EN9 201 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 MMABQ96EY8 250 aaPredicted RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 PRR11Q96HE9 360 aaPredicted RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 SMIM10Q96HG1 83 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 GBP5Q96PP8 586 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 TGIF2Q9GZN2 237 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 LHX9Q9NQ69 397 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 ZDHHC2Q9UIJ5 367 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 MCM8Q9UJA3 840 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 ZNF225Q9UK10 706 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 TRIM33Q9UPN9 1127 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 WASF3Q9UPY6 502 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 EIF3LQ9Y262 564 aaKnown RBP11.28□□□□□ -0.6
LINC00290-201ENST00000512487 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
LINC00290-201ENST00000512487 SPTBN4Q9H254 2564 aa11.27□□□□□ -0.6
LINC00290-201ENST00000512487 BRINP1O60477 761 aa11.27□□□□□ -0.61
LINC00290-201ENST00000512487 KLHL41O60662 606 aa11.27□□□□□ -0.61
LINC00290-201ENST00000512487 RAD1O60671 282 aa11.27□□□□□ -0.61
LINC00290-201ENST00000512487 PRAMEF10O60809 474 aa11.27□□□□□ -0.61
LINC00290-201ENST00000512487 LYPLA1O75608 230 aaPredicted RBP11.27□□□□□ -0.61
LINC00290-201ENST00000512487 KLHL18O94889 574 aa11.27□□□□□ -0.61
LINC00290-201ENST00000512487 CHRNGP07510 517 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms