RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 HNF4AP41235 474 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 PREPP48147 710 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 KRT6CP48668 564 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 FOXA1P55317 472 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 ITGA1P56199 1179 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 KLF10Q13118 480 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 GRB7Q14451 532 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 MAPRE2Q15555 327 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 PLEKHN1Q494U1 663 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 DNAL1Q4LDG9 190 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 CLEC6AQ6EIG7 209 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 AGTRAPQ6RW13 159 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 ABRAXAS1Q6UWZ7 409 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 RPS27LQ71UM5 84 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 MILR1Q7Z6M3 343 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 LILRA3Q8N6C8 439 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 OR4F6Q8NGB9 312 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 CT55Q8WUE5 264 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 ZFPM2Q8WW38 1151 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 TFGQ92734 400 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 PNPLA2Q96AD5 504 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 KLHL29Q96CT2 875 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 PPP3R2Q96LZ3 170 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 INSM2Q96T92 566 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 PKP4Q99569 1192 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 MIPEPQ99797 713 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 MENTQ9BUN1 341 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 ACTL8Q9H568 366 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 WDR55Q9H6Y2 383 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 MVB12BQ9H7P6 319 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 SDR39U1Q9NRG7 319 aaPredicted RBP10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 ARL8BQ9NVJ2 186 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 PDP2Q9P2J9 529 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 POLG2Q9UHN1 485 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 ANGPTL3Q9Y5C1 460 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 HEBP2Q9Y5Z4 205 aa10.02□□□□□ -0.81
PDLIM5-217ENST00000512274 DIDO1Q9BTC0 2240 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 E7ENX8 843 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 E9PBE3 544 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 SLC28A1O00337 649 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 KDM1AO60341 852 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 CCNT2O60583 730 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 KLHL41O60662 606 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 OR4F21O95013 312 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 NADKO95544 446 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 SLC16A8O95907 504 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 CAPN1P07384 714 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 ESRRAP11474 423 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 IDO1P14902 403 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 NDUFS1P28331 727 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 PRDX3P30048 256 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 ACTR1BP42025 376 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 PER3P56645 1201 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 ACTR1AP61163 376 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 ERVK-8P63133 956 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 GPLD1P80108 840 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 TAP2Q03519 686 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 EMX2Q04743 252 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 MAD2L1Q13257 205 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 RAPSNQ13702 412 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 NFE2L1Q14494 772 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 RBBP7Q16576 425 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 PLA2G4EQ3MJ16 856 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 CAPN13Q6MZZ7 669 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 FAM83HQ6ZRV2 1179 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 Q6ZSR9 355 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 FAM9CQ8IZT9 166 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 FDCSPQ8NFU4 85 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 METTL6Q8TCB7 284 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 AGR3Q8TD06 166 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 ZNF480Q8WV37 535 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 SKA2Q8WVK7 121 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 C3orf30Q96M34 536 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 RAB3IPQ96QF0 476 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 OR2M4Q96R27 311 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 BTBD10Q9BSF8 475 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 NUDT9Q9BW91 350 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 RASSF4Q9H2L5 321 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 AKTIPQ9H8T0 292 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 NDE1Q9NXR1 346 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 SLC23A2Q9UGH3 650 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 SUFUQ9UMX1 484 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 SNX6Q9UNH7 406 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 OSGIN2Q9Y236 505 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 TMED5Q9Y3A6 229 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 COPG1Q9Y678 874 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 KCNE2Q9Y6J6 123 aa10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 SETD2Q9BYW2 2564 aaPredicted RBP10.01□□□□□ -0.81
PDLIM5-217ENST00000512274 BBIP1A8MTZ0 92 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 ULK1O75385 1050 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 SKAP2O75563 359 aaPredicted RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 CRCPO75575 148 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 RSL1D1O76021 490 aaKnown RBP10□□□□□ -0.81
PDLIM5-217ENST00000512274 SLC35G4P0C7Q5 338 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 GNAZP19086 355 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 IDSP22304 550 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 PIK3R1P27986 724 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 HMOX2P30519 316 aa10□□□□□ -0.81
PDLIM5-217ENST00000512274 CPOXP36551 454 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms