RNA–Protein interactions for RNA: ENST00000512094.5

NPHP3-210, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-210ENST00000512094 TBX15Q96SF7 602 aa2.33□□□□□ -2.04
NPHP3-210ENST00000512094 PATZ1Q9HBE1 687 aaKnown RBP2.33□□□□□ -2.04
NPHP3-210ENST00000512094 TXNDC16Q9P2K2 825 aa2.33□□□□□ -2.04
NPHP3-210ENST00000512094 RAB26Q9ULW5 256 aa2.33□□□□□ -2.04
NPHP3-210ENST00000512094 MTF2Q9Y483 593 aaPredicted RBP2.33□□□□□ -2.04
NPHP3-210ENST00000512094 CDC42BPBQ9Y5S2 1711 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 FSD2A1L4K1 749 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 TCP10L2B9ZVM9 353 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 FBP2O00757 339 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 GSRP00390 522 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 SERPING1P05155 500 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 PEX3P56589 373 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 CXCL6P80162 114 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 DHX8Q14562 1220 aaKnown RBP2.32□□□□□ -2.04
NPHP3-210ENST00000512094 AGBL2Q5U5Z8 902 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 Q71RC1 249 aaPredicted RBP2.32□□□□□ -2.04
NPHP3-210ENST00000512094 NUFIP2Q7Z417 695 aaKnown RBP2.32□□□□□ -2.04
NPHP3-210ENST00000512094 NAXEQ8NCW5 288 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 CFAP61Q8NHU2 1237 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 FAM122AQ96E09 287 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 MXD3Q9BW11 206 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 SLC24A2Q9UI40 661 aa2.32□□□□□ -2.04
NPHP3-210ENST00000512094 NIP7Q9Y221 180 aaKnown RBP eCLIP2.32□□□□□ -2.04
NPHP3-210ENST00000512094 PI4KAP2A4QPH2 592 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 C17orf105B2RV13 164 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 NPHP1O15259 732 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 WISP3O95389 354 aaPredicted RBP2.31□□□□□ -2.04
NPHP3-210ENST00000512094 HNRNPA2B1P22626 353 aaKnown RBP2.31□□□□□ -2.04
NPHP3-210ENST00000512094 RALGDSQ12967 914 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 PSG7Q13046 419 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 ZRSR2Q15696 482 aaKnown RBP2.31□□□□□ -2.04
NPHP3-210ENST00000512094 AGAP6Q5VW22 663 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 SLC22A18ASQ8N1D0 253 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 GANCQ8TET4 914 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 ZNF622Q969S3 477 aaKnown RBP eCLIP2.31□□□□□ -2.04
NPHP3-210ENST00000512094 RIMS4Q9H426 269 aaPredicted RBP2.31□□□□□ -2.04
NPHP3-210ENST00000512094 GOLPH3LQ9H4A5 285 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 FNDC4Q9H6D8 234 aaPredicted RBP2.31□□□□□ -2.04
NPHP3-210ENST00000512094 NTN4Q9HB63 628 aa2.31□□□□□ -2.04
NPHP3-210ENST00000512094 FAM231BA6NCW3 169 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 TRIM77I1YAP6 450 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 PTGESO14684 152 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 ASCL1P50553 236 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 CLDN17P56750 224 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 ILF2Q12905 390 aaKnown RBP2.3□□□□□ -2.04
NPHP3-210ENST00000512094 FASTKQ14296 549 aaKnown RBP2.3□□□□□ -2.04
NPHP3-210ENST00000512094 PLEKHS1Q5SXH7 462 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 TEX26Q8N6G2 289 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 TPRX1Q8N7U7 411 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 HDAC2Q92769 488 aaKnown RBP2.3□□□□□ -2.04
NPHP3-210ENST00000512094 CPNE1Q99829 537 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 CHRDL1Q9BU40 450 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 PLEKHA3Q9HB20 300 aa2.3□□□□□ -2.04
NPHP3-210ENST00000512094 CRNNQ9UBG3 495 aaPredicted RBP2.3□□□□□ -2.04
NPHP3-210ENST00000512094 A0A1W2PPM1 405 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 RECQL5O94762 991 aaPredicted RBP2.29□□□□□ -2.04
NPHP3-210ENST00000512094 DNTTP04053 509 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 STAT2P52630 851 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 NDST1P52848 882 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 TMEM95Q3KNT9 176 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 ZNF776Q68DI1 518 aaPredicted RBP2.29□□□□□ -2.04
NPHP3-210ENST00000512094 MACC1Q6ZN28 852 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 PPM1MQ96MI6 270 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 EXOC1Q9NV70 894 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 PGAP2Q9UHJ9 254 aa2.29□□□□□ -2.04
NPHP3-210ENST00000512094 IGLV3-16A0A075B6K0 115 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 A0A087X0M5 115 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 A0A1B0GX30 115 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 A0A1W2PQ09 198 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 CCT8L1PA6NM43 557 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 TRIM49D1C9J1S8 452 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 LMO7DNF2Z398 122 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 USO1O60763 962 aaKnown RBP2.28□□□□□ -2.04
NPHP3-210ENST00000512094 IGHG3P01860 377 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 SKILP12757 684 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 DUTP33316 252 aaKnown RBP2.28□□□□□ -2.04
NPHP3-210ENST00000512094 HMGCLP35914 325 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 POLR2LP62875 67 aaKnown RBP2.28□□□□□ -2.04
NPHP3-210ENST00000512094 GNB2P62879 340 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 ZNF33BQ06732 778 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 C17orf58Q2M2W7 97 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 ARMCX4Q5H9R4 360 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 LIPJQ5W064 366 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 MINDY1Q8N5J2 469 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 BEST4Q8NFU0 473 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 PGM2Q96G03 612 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 RBM41Q96IZ5 413 aaKnown RBP2.28□□□□□ -2.04
NPHP3-210ENST00000512094 CCT8L2Q96SF2 557 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 UNC45AQ9H3U1 944 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 DNAJC4Q9NNZ3 241 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 C9orf78Q9NZ63 289 aaPredicted RBP2.28□□□□□ -2.04
NPHP3-210ENST00000512094 TMEM9Q9P0T7 183 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 FBXO7Q9Y3I1 522 aa2.28□□□□□ -2.04
NPHP3-210ENST00000512094 PGPEP1LA6NFU8 196 aa2.27□□□□□ -2.05
NPHP3-210ENST00000512094 SAP18O00422 153 aaKnown RBP2.27□□□□□ -2.05
NPHP3-210ENST00000512094 AP3D1O14617 1153 aa2.27□□□□□ -2.05
NPHP3-210ENST00000512094 FRAT2O75474 233 aaPredicted RBP2.27□□□□□ -2.05
NPHP3-210ENST00000512094 SLC1A6P48664 564 aa2.27□□□□□ -2.05
NPHP3-210ENST00000512094 PPOXP50336 477 aa2.27□□□□□ -2.05
NPHP3-210ENST00000512094 EIF5P55010 431 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms