RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	ITPR3	Q14573	2671 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	PRRC2B	Q5JSZ5	2229 aa	Known RBP	4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	YDJC	A8MPS7	323 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	SNX3	O60493	162 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	SEC24A	O95486	1093 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	FYN	P06241	537 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	PRKAR1A	P10644	381 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	EPCAM	P16422	314 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	CD27	P26842	260 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	HSPA4	P34932	840 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	LIMK1	P53667	647 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	NPTX1	Q15818	432 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	TCP11X2	Q5H9J9	407 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	RPUSD3	Q6P087	351 aa	Known RBP	4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	TRIM65	Q6PJ69	517 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	SLC25A47	Q6Q0C1	308 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	CAMKV	Q8NCB2	501 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	OR6S1	Q8NH40	331 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	OR1L3	Q8NH93	324 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	VPS33A	Q96AX1	596 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	C4orf45	Q96LM5	186 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	IWS1	Q96ST2	819 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	NKX3-1	Q99801	234 aa	Predicted RBP	4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	SYT11	Q9BT88	431 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	THAP2	Q9H0W7	228 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	XAB2	Q9HCS7	855 aa	Known RBP	4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	MAN2C1	Q9NTJ4	1040 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	ERAP1	Q9NZ08	941 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	RNF215	Q9Y6U7	377 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895		A0A0G2JMZ2	1700 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	SPEG	Q15772	3267 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	MAST2	Q6P0Q8	1798 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	TECTA	O75443	2155 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	ZZEF1	O43149	2961 aa		4.88	□□□□□ -1.63
LINC01088-208	ENST00000511895	MYO9A	B2RTY4	2548 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	FRY	Q5TBA9	3013 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	HECTD1	Q9ULT8	2610 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895		A0A0J9YWU9	116 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895		H7C423	109 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	ZNF500	O60304	480 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	PLOD3	O60568	738 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	ZFAND5	O76080	213 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	GSR	P00390	522 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	MYL6B	P14649	208 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	MMP12	P39900	470 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	OPRL1	P41146	370 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	LEPR	P48357	1165 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	DNA2	P51530	1060 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	MYL7	Q01449	175 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	TRAP1	Q12931	704 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	DRP2	Q13474	957 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	NONO	Q15233	471 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	LRRC26	Q2I0M4	334 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	CHST3	Q7LGC8	479 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	NBPF5P	Q86XG9	351 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	ANKRD13C	Q8N6S4	541 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	SLC37A3	Q8NCC5	494 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	OR7A2P	Q8NGA2	310 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	ZNF486	Q96H40	463 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	USP28	Q96RU2	1077 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	HNRNPAB	Q99729	332 aa	Known RBP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	TRIM15	Q9C019	465 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	ANKRD2	Q9GZV1	360 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	GSN-AS1	Q9NRJ2	163 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	CLIC5	Q9NZA1	410 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	PRSS21	Q9Y6M0	314 aa		4.87	□□□□□ -1.63
LINC01088-208	ENST00000511895	SPTA1	P02549	2419 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	KMT2E	Q8IZD2	1858 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	CEP295	Q9C0D2	2601 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895		A0A1W2PPK0	400 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	CASTOR2	A6NHX0	329 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	SNURFL	B1AK76	121 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	TBX10	O75333	385 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	MOCS3	O95396	460 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	UBASH3A	P57075	661 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	COG2	Q14746	738 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	ZNF74	Q16587	644 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	KRBOX4	Q5JUW0	171 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	LYSMD4	Q5XG99	296 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	RASGEF1A	Q8N9B8	481 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	MAPK15	Q8TD08	544 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	APOBEC4	Q8WW27	367 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	ZNF689	Q96CS4	500 aa	Predicted RBP	4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	C18orf12	Q96KH6	178 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	AGAP3	Q96P47	875 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	LRRC3B	Q96PB8	259 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	GTPBP2	Q9BX10	602 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	NYX	Q9GZU5	481 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	SPHK2	Q9NRA0	654 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	C5AR2	Q9P296	337 aa		4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	SPTAN1	Q13813	2472 aa	Known RBP	4.86	□□□□□ -1.63
LINC01088-208	ENST00000511895	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC01088-208	ENST00000511895	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.85	□□□□□ -1.63
LINC01088-208	ENST00000511895	C15orf61	A6NNL5	157 aa		4.85	□□□□□ -1.63
LINC01088-208	ENST00000511895		A8MXE2	369 aa		4.85	□□□□□ -1.63
LINC01088-208	ENST00000511895		O00370	1275 aa		4.85	□□□□□ -1.63
LINC01088-208	ENST00000511895	SORBS2	O94875	1100 aa	Known RBP	4.85	□□□□□ -1.63
LINC01088-208	ENST00000511895	CCDC175	P0C221	793 aa		4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms