RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, human

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCHCR1-222	ENST00000507459	KCNC4	Q03721	635 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LAPTM5	Q13571	262 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PCOLCE	Q15113	449 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	NSDHL	Q15738	373 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PAGE2B	Q5JRK9	111 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SLC6A19	Q695T7	634 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LINC00696	Q6ZRV3	163 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	MYLK4	Q86YV6	388 aa	Predicted RBP	13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZADH2	Q8N4Q0	377 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	UBTD2	Q8WUN7	234 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TM9SF4	Q92544	642 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	TBC1D20	Q96BZ9	403 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	SMIM10	Q96HG1	83 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	OR1F2P	Q96R84	312 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	EFCAB11	Q9BUY7	163 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PITHD1	Q9GZP4	211 aa	Predicted RBP	13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZNF700	Q9H0M5	742 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LANCL2	Q9NS86	450 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	RIC8B	Q9NVN3	520 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PTGFRN	Q9P2B2	879 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	MAP10	Q9P2G4	905 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	ZNF180	Q9UJW8	692 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	PLAA	Q9Y263	795 aa		13.34	□□□□□ -0.27
CCHCR1-222	ENST00000507459	LRRC14B	A6NHZ5	514 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PSMD12	O00232	456 aa	Predicted RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SH3BGRL	O75368	114 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CLEC3A	O75596	197 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	WFS1	O76024	890 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ABHD2	P08910	425 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SNRPA	P09012	282 aa	Known RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PRR35	P0CG20	571 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PCNA	P12004	261 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	IL10	P22301	178 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GSTM2	P28161	218 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MAGEA12	P43365	314 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PLA2G16	P53816	162 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ALDH18A1	P54886	795 aa	Known RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	RHAG	Q02094	409 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ACTN3	Q08043	901 aa	Predicted RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SLC29A2	Q14542	456 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ABRAXAS2	Q15018	415 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SETDB1	Q15047	1291 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TBCC	Q15814	346 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TECRL	Q5HYJ1	363 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	LGSN	Q5TDP6	509 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	VN1R5	Q7Z5H4	357 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ANKRD37	Q7Z713	158 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SIRT6	Q8N6T7	355 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	BRIX1	Q8TDN6	353 aa	Known RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TSLP	Q969D9	159 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GAL3ST3	Q96A11	431 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ISL2	Q96A47	359 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PNPLA2	Q96AD5	504 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MS4A6E	Q96DS6	147 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	WDR34	Q96EX3	536 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TUBB6	Q9BUF5	446 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	REXO4	Q9GZR2	422 aa	Known RBP	13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	L2HGDH	Q9H9P8	463 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	COPG2	Q9UBF2	871 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CNTRL	Q7Z7A1	2325 aa		13.33	□□□□□ -0.28
CCHCR1-222	ENST00000507459		A0A1W2PQ72	361 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CCDC189	A1A4V9	331 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	FAM227A	F5H4B4	570 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SIX3	O95343	332 aa	Predicted RBP	13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SERPINA7	P05543	415 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	RBP1	P09455	135 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MYBL2	P10244	700 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	RNH1	P13489	461 aa	Known RBP	13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	JAK1	P23458	1154 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	GCA	P28676	217 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	BTG2	P78543	158 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	FOXK1	P85037	733 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	BTBD16	Q32M84	506 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MED27	Q6P2C8	311 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	TRIM40	Q6P9F5	258 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	IGFL3	Q6UXB1	125 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ISLR2	Q6UXK2	745 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CA13	Q8N1Q1	262 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	EFCAB3	Q8N7B9	438 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PLPP5	Q8NEB5	264 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CPT1C	Q8TCG5	803 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PHF21B	Q96EK2	531 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	SEC16B	Q96JE7	1060 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CNDP1	Q96KN2	507 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	PTCHD1	Q96NR3	888 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	F2RL3	Q96RI0	385 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	EPS8L2	Q9H6S3	715 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	XPR1	Q9UBH6	696 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	B3GNT3	Q9Y2A9	372 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	CSAG2	Q9Y5P2	127 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	NBAS	A2RRP1	2371 aa		13.32	□□□□□ -0.28
CCHCR1-222	ENST00000507459	MAGEB17	A8MXT2	336 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	B3GALT2	O43825	422 aa		13.31	□□□□□ -0.28
CCHCR1-222	ENST00000507459	KLK8	O60259	260 aa		13.31	□□□□□ -0.28

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