RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 SLC6A16Q9GZN6 736 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 RHBGQ9H310 441 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF835Q9Y2P0 537 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 PSAT1Q9Y617 370 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 TEX264Q9Y6I9 313 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 PCNX1Q96RV3 2341 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 CACNA1CQ13936 2221 aa10.82□□□□□ -0.68
HMGCS1-204ENST00000507293 ABCA12Q86UK0 2595 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 IGKV3D-11A0A0A0MRZ8 115 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 URADA6NGE7 173 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 A8MUA0 341 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 C4orf51C9J302 202 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 PSMD12O00232 456 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 ZSCAN12O43309 604 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 PRMT3O60678 531 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 SLC25A12O75746 678 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 RNH1P13489 461 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 TCP1P17987 556 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 HSF1Q00613 529 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF460Q14592 562 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 MAPKAPK3Q16644 382 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF630Q2M218 657 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 XKRXQ6PP77 449 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 NXPE4Q6UWF7 544 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 Q6ZPB1 254 aaPredicted RBP10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 SPPL2CQ8IUH8 684 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 SIAH3Q8IW03 269 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 CA13Q8N1Q1 262 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 TRPV3Q8NET8 790 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 LRRC39Q96DD0 335 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 CAPZA3Q96KX2 299 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 EGFL8Q99944 293 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 TRIM51Q9BSJ1 452 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 AICDAQ9GZX7 198 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 KLHL31Q9H511 634 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 CLK4Q9HAZ1 481 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 CHST11Q9NPF2 352 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 NECTIN3Q9NQS3 549 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 PRDM9Q9NQV7 894 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 TRMT1Q9NXH9 659 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 SLC22A14Q9Y267 594 aa10.81□□□□□ -0.68
HMGCS1-204ENST00000507293 FAM95CA0A1B0GW59 222 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 TCRBV16S1A1N1A0A5B0 115 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNHIT1O43257 154 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ASNA1O43681 348 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 NME2P1O60361 137 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 WDR47O94967 919 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 SMIM10L1P0DMW3 83 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 COX6B1P14854 86 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ABOP16442 354 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 NME2P22392 152 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 PTGER4P35408 488 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 CYB561P49447 251 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 SMSP52788 366 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ITGA8P53708 1063 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ARL4CP56559 192 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 MLF1P58340 268 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 CDKL1Q00532 357 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 DR1Q01658 176 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 MGAT5Q09328 741 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 FRG1Q14331 258 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 C18orf21Q32NC0 220 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 NCCRP1Q6ZVX7 275 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 SYDE1Q6ZW31 735 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 GDF7Q7Z4P5 450 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ZC3HC1Q86WB0 502 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF227Q86WZ6 799 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 NKAPQ8N5F7 415 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 CPSF7Q8N684 471 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 NFAM1Q8NET5 270 aaPredicted RBP10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 CREB3L4Q8TEY5 395 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 SMIM10Q96HG1 83 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 ZFATQ9P243 1243 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 MEMO1Q9Y316 297 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 OARD1Q9Y530 152 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 KCNE2Q9Y6J6 123 aa10.8□□□□□ -0.68
HMGCS1-204ENST00000507293 A0A0G2JN53 185 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 TRBV11-1A0A0K0K1C0 115 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 CDK2AP1O14519 115 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 FCHO1O14526 889 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 SERPINA6P08185 405 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 ZNF24P17028 368 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 AGAP20933 346 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 TRHRP34981 398 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 HLCSP50747 726 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 TAS2R39P59534 338 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 BTN3A2P78410 334 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 PDIA2Q13087 525 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 FASTKD3Q14CZ7 662 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 CDSNQ15517 529 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 TSNQ15631 228 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 RNFT1Q5M7Z0 435 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 FRA10AC1Q70Z53 315 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 GHDCQ8N2G8 530 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 FBXO36Q8NEA4 188 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 ARMC2Q8NEN0 867 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 ADAMTS18Q8TE60 1221 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 ANKRD49Q8WVL7 239 aa10.79□□□□□ -0.68
HMGCS1-204ENST00000507293 ANKRD7Q92527 254 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms