RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SLC22A15Q8IZD6 547 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 PLD6Q8N2A8 252 aaKnown RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 PLD5Q8N7P1 536 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 FBXO15Q8NCQ5 510 aaPredicted RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 NFAM1Q8NET5 270 aaPredicted RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 NEIL3Q8TAT5 605 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 GSDMBQ8TAX9 411 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 ENOX1Q8TC92 643 aaKnown RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 IGFBPL1Q8WX77 278 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 GTPBP3Q969Y2 492 aaKnown RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 ART5Q96L15 291 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 JSRP1Q96MG2 331 aaPredicted RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 RNF157Q96PX1 679 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 FAM111AQ96PZ2 611 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 CCDC77Q9BR77 488 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 SLCO5A1Q9H2Y9 848 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 ESRP2Q9H6T0 727 aaKnown RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 ANKHQ9HCJ1 492 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 LANCL2Q9NS86 450 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 UTP6Q9NYH9 597 aaKnown RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 SAMD15Q9P1V8 674 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 KLHL8Q9P2G9 620 aaPredicted RBP6.64□□□□□ -1.35
VCAN-207ENST00000507162 FREM3P0C091 2139 aa6.64□□□□□ -1.35
VCAN-207ENST00000507162 VWFP04275 2813 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 TRBV5-4A0A0C4DH59 114 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 IGKV1-8A0A0C4DH67 115 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 MYO1FO00160 1098 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 APOL1O14791 398 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 HAT1O14929 419 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 TCF21O43680 179 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 PRKNO60260 465 aaPredicted RBP6.63□□□□□ -1.35
VCAN-207ENST00000507162 PHF2O75151 1096 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 ZFAND5O76080 213 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 TPM2P07951 284 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 FHP07954 510 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 EZRP15311 586 aaKnown RBP6.63□□□□□ -1.35
VCAN-207ENST00000507162 ITGA2P17301 1181 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 PIGAP37287 484 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 DIO3P55073 304 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 RPS4XP62701 263 aaKnown RBP6.63□□□□□ -1.35
VCAN-207ENST00000507162 DYNLT1P63172 113 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 TMEM249Q2WGJ8 235 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 CYB5R2Q6BCY4 276 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 RTL4Q6ZR62 310 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 ZNF550Q7Z398 422 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 PCGF5Q86SE9 256 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 CPNE8Q86YQ8 564 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 GPALPP1Q8IXQ4 340 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 ARMC10Q8N2F6 343 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 RASGEF1CQ8N431 466 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 C9orf106Q8NAJ2 232 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 OR5T3Q8NGG3 340 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 ASZ1Q8WWH4 475 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 SLC44A1Q8WWI5 657 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 RAPGEF5Q92565 580 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 DNAJC1Q96KC8 554 aaKnown RBP6.63□□□□□ -1.35
VCAN-207ENST00000507162 QRFPRQ96P65 431 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 OR1F2PQ96R84 312 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 FCRL5Q96RD9 977 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 TIMP4Q99727 224 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 RHNO1Q9BSD3 238 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 ANGPTL4Q9BY76 406 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 CHODLQ9H9P2 273 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 L2HGDHQ9H9P8 463 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 PNO1Q9NRX1 252 aaKnown RBP6.63□□□□□ -1.35
VCAN-207ENST00000507162 SACM1LQ9NTJ5 587 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 HEATR5BQ9P2D3 2071 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 ANAPC7Q9UJX3 599 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 NAALAD2Q9Y3Q0 740 aa6.63□□□□□ -1.35
VCAN-207ENST00000507162 MALRD1Q5VYJ5 2156 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 NINQ8N4C6 2090 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 GRID2IPA4D2P6 1211 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 IQCF5A8MTL0 148 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 CHST10O43529 356 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 OR1I1O60431 355 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 TMCC2O75069 709 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 TRAPPC6AO75865 159 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 MYO1DO94832 1006 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 C1orf105O95561 183 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 PLAUP00749 431 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 APOA4P06727 396 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 CCL3P10147 92 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 MYBL1P10243 752 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 GZMAP12544 262 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 MAOAP21397 527 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 IL10P22301 178 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 KDELR1P24390 212 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 RBMXP38159 391 aaKnown RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 CDKN1AP38936 164 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 ZNF140P52738 457 aaPredicted RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 GEMP55040 296 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 MTTPP55157 894 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 TAS2R40P59535 323 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 KCNJ2P63252 427 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 OLR1P78380 273 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 MEF2AQ02078 507 aaPredicted RBP6.62□□□□□ -1.35
VCAN-207ENST00000507162 WASHC5Q12768 1159 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 DUSP8Q13202 625 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 SQLEQ14534 574 aa6.62□□□□□ -1.35
VCAN-207ENST00000507162 P3H1Q32P28 736 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms