RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ACMSDQ8TDX5 336 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 ZNF473Q8WTR7 871 aaKnown RBP16.84■□□□□ 0.29
SMN1-204ENST00000506163 CCT6BQ92526 530 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 FER1L6-AS2Q96M78 137 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 QRFPRQ96P65 431 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 F2RL3Q96RI0 385 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 SLC25A23Q9BV35 468 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 RBCK1Q9BYM8 510 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 IPPKQ9H8X2 491 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 PCTPQ9UKL6 214 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 EMCNQ9ULC0 261 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 RNF11Q9Y3C5 154 aa16.84■□□□□ 0.29
SMN1-204ENST00000506163 TNPO3Q9Y5L0 923 aaKnown RBP16.84■□□□□ 0.29
SMN1-204ENST00000506163 FASNP49327 2511 aaKnown RBP16.84■□□□□ 0.29
SMN1-204ENST00000506163 SPENQ96T58 3664 aaKnown RBP16.83■□□□□ 0.28
SMN1-204ENST00000506163 ANKDD1BA6NHY2 528 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 DLX3O60479 287 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 IGHEP01854 428 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 RRADP55042 308 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 BTN3A2P78410 334 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 LAPTM5Q13571 262 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 LACTB2Q53H82 288 aaPredicted RBP16.83■□□□□ 0.28
SMN1-204ENST00000506163 METTL2BQ6P1Q9 378 aaKnown RBP16.83■□□□□ 0.28
SMN1-204ENST00000506163 LANCL3Q6ZV70 420 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 OR52B6Q8NGF0 335 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 SEC16BQ96JE7 1060 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 CDK15Q96Q40 435 aa16.83■□□□□ 0.28
SMN1-204ENST00000506163 NOL11Q9H8H0 719 aaKnown RBP16.83■□□□□ 0.28
SMN1-204ENST00000506163 PCDHGA9Q9Y5G4 932 aaKnown RBP16.83■□□□□ 0.28
SMN1-204ENST00000506163 CNTRLQ7Z7A1 2325 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 LOC102723996A0A087X1L8 192 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 A0A1W2PQ72 361 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 B8ZZF3 427 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 FAM227AF5H4B4 570 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 ERI3O43414 337 aaKnown RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 SMIM24O75264 130 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 SH3BGRLO75368 114 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 CDC123O75794 336 aaPredicted RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 RPS17P08708 135 aaKnown RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 NUDT17P0C025 328 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 COX6A1P12074 109 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 GSTM2P28161 218 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 PLA2G16P53816 162 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 SOX8P57073 446 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 STXBP1P61764 594 aaKnown RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 RHAGQ02094 409 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 EEF1A2Q05639 463 aaKnown RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 C19orf57Q0VDD7 668 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 RASA2Q15283 850 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 PAGE2BQ5JRK9 111 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 MED27Q6P2C8 311 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 ABHD17CQ6PCB6 329 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 CA13Q8N1Q1 262 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 GALNT16Q8N428 558 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 L3MBTL4Q8NA19 623 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 CAVIN3Q969G5 261 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 GAL3ST3Q96A11 431 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 MS4A8Q9BY19 250 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 REXO4Q9GZR2 422 aaKnown RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 C12orf65Q9H3J6 166 aaKnown RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 ZNF552Q9H707 407 aaPredicted RBP16.82■□□□□ 0.28
SMN1-204ENST00000506163 ATP13A2Q9NQ11 1180 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 PRDM7Q9NQW5 492 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 RAB21Q9UL25 225 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 ANGPTL3Q9Y5C1 460 aa16.82■□□□□ 0.28
SMN1-204ENST00000506163 IGHV3-20A0A0C4DH32 117 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 TGFB1P01137 390 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 CELA2AP08217 269 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 PCNAP12004 261 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 ACPPP15309 386 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 DEKP35659 375 aaKnown RBP16.81■□□□□ 0.28
SMN1-204ENST00000506163 PIK3CGP48736 1102 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 CDH13P55290 713 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 PCOLCEQ15113 449 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 HIST2H2ACQ16777 129 aaPredicted RBP16.81■□□□□ 0.28
SMN1-204ENST00000506163 TUBB8Q3ZCM7 444 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 MINDY4Q4G0A6 757 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 UNC50Q53HI1 259 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 LIPJQ5W064 366 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 HIST2H2AA3Q6FI13 130 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 EMBQ6PCB8 327 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 ASB18Q6ZVZ8 466 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 PARP9Q8IXQ6 854 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 OR2L5Q8NG80 312 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 HUS1BQ8NHY5 278 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 TSLPQ969D9 159 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 TBC1D20Q96BZ9 403 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 SMAD5Q99717 465 aaKnown RBP16.81■□□□□ 0.28
SMN1-204ENST00000506163 C1QTNF3Q9BXJ4 246 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 ACTR8Q9H981 624 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 ZBTB20Q9HC78 741 aaPredicted RBP16.81■□□□□ 0.28
SMN1-204ENST00000506163 ZNF160Q9HCG1 818 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 ZNF225Q9UK10 706 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 TMCO1Q9UM00 188 aa16.81■□□□□ 0.28
SMN1-204ENST00000506163 IGHV1-45A0A0A0MS14 117 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 URADA6NGE7 173 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 RTCAO00442 366 aaKnown RBP16.8■□□□□ 0.28
SMN1-204ENST00000506163 TSPAN8P19075 237 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 NEK2P51955 445 aa16.8■□□□□ 0.28
SMN1-204ENST00000506163 BTG2P78543 158 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms