RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 A0A1W2PPV9 198 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 SLC5A10A0PJK1 596 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 SAGE2PA6NJ88 616 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 C16orf97H3BN30 126 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 BIN1O00499 593 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PES1O00541 588 aaKnown RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 SMAD9O15198 467 aaKnown RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PRPF4O43172 522 aaKnown RBP eCLIP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PRPSAP2O60256 369 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 OR2J2O76002 312 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 GNA14O95837 355 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 S1PR4O95977 384 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 ESR1P03372 595 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 EIF2S1P05198 315 aaKnown RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CD48P09326 243 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 NUDT17P0C025 328 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 ZNF23P17027 643 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PTNP21246 168 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 MDKP21741 143 aaPredicted RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CD9P21926 228 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PIGAP37287 484 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 XCR1P46094 333 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 KCNC1P48547 511 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 HCAR3P49019 387 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 SSR4P51571 173 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CDH6P55285 790 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 FKBP3Q00688 224 aaKnown RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 RPA4Q13156 261 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PTK6Q13882 451 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 FAM53BQ14153 422 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 GGTLC2Q14390 218 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 NSDHLQ15738 373 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 COBLL1Q53SF7 1204 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PPP1R15BQ5SWA1 713 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 NAA35Q5VZE5 725 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 KCTD11Q693B1 232 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 TRIM65Q6PJ69 517 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 IL20RBQ6UXL0 311 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 FAM151BQ6UXP7 276 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 ENOSF1Q7L5Y1 443 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 POLNQ7Z5Q5 900 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 KIAA1328Q86T90 577 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 NT5DC3Q86UY8 548 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 TAX1BP1Q86VP1 789 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 PDSS2Q86YH6 399 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 GPALPP1Q8IXQ4 340 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 FAM71AQ8IYT1 594 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 TBC1D21Q8IYX1 336 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 C2orf73Q8N5S3 287 aaPredicted RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 GOLM1Q8NBJ4 401 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 KBTBD8Q8NFY9 601 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 OR9A4Q8NGU2 314 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 ZPLD1Q8TCW7 415 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 NELFBQ8WX92 580 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 ASB11Q8WXH4 323 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CPA5Q8WXQ8 436 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CCDC138Q96M89 665 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CEP63Q96MT8 703 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 OR2A5Q96R48 311 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 RASL10BQ96S79 203 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 TUBA1CQ9BQE3 449 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 SNRNP25Q9BV90 132 aaKnown RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CACNG6Q9BXT2 260 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 UGT2B28Q9BY64 529 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 OPN3Q9H1Y3 402 aaPredicted RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 UBQLN3Q9H347 655 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 EXO5Q9H790 373 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 LIN28AQ9H9Z2 209 aaKnown RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 SIX2Q9NPC8 291 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 QPCTLQ9NXS2 382 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 ELOVL5Q9NYP7 299 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 KLHL21Q9UJP4 597 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 MAN1B1Q9UKM7 699 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CAPN11Q9UMQ6 739 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 AP4E1Q9UPM8 1137 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 YARS2Q9Y2Z4 477 aaKnown RBP3.02□□□□□ -1.93
TCOF1-208ENST00000506063 SPEF1Q9Y4P9 236 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 CLDN16Q9Y5I7 305 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 FAM169AQ9Y6X4 670 aa3.02□□□□□ -1.93
TCOF1-208ENST00000506063 HUWE1Q7Z6Z7 4374 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 IGLV3-16A0A075B6K0 115 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 C15orf38-AP3S2A0A0A6YYH1 394 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 TRBV11-1A0A0K0K1C0 115 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 LRP5LA4QPB2 252 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 KRT87PA6NCN2 255 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 GOLGA6L9A6NEM1 432 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 A8MVJ9 347 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SHISA9B4DS77 424 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 H0YIG0 161 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 C3orf84H3BNL1 204 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 GOLGA8MH3BSY2 632 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 H7C417 338 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 IFRD1O00458 451 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 SCAMP2O15127 329 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 FRS3O43559 492 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 CDC123O75794 336 aaPredicted RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 PDE5AO76074 875 aa3.01□□□□□ -1.93
TCOF1-208ENST00000506063 NSA2O95478 260 aaKnown RBP3.01□□□□□ -1.93
TCOF1-208ENST00000506063 LSM8O95777 96 aaKnown RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms