RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 OR56A3Q8NH54 315 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 FAM57AQ8TBR7 257 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 FBXL8Q96CD0 374 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 NDNQ99608 321 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 PELI2Q9HAT8 420 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 ERVK-11Q9UQG0 969 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 NCOA6Q14686 2063 aaPredicted RBP19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 APCP25054 2843 aa19.7■□□□□ 0.74
SQSTM1-210ENST00000506042 OR2W5A6NFC9 320 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 PGRMC1O00264 195 aaKnown RBP19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 CDC40O60508 579 aaKnown RBP eCLIP19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 TUBB4AP04350 444 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 CD1EP15812 388 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 CHRNB4P30926 498 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 MAGEA3P43357 314 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 MEOX1P50221 254 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 CRYMQ14894 314 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 FAM45BPQ6NSW5 357 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 RGS9BPQ6ZS82 235 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 ACAD11Q709F0 780 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 B3GNT7Q8NFL0 401 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 OR5T3Q8NGG3 340 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 FAM45AQ8TCE6 357 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 RND1Q92730 232 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 VMP1Q96GC9 406 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 ENKD1Q9H0I2 346 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 IGSF5Q9NSI5 407 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 FBXW2Q9UKT8 454 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 JRKLQ9Y4A0 524 aa19.69■□□□□ 0.74
SQSTM1-210ENST00000506042 TCRBV16S1A1N1A0A5B0 115 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 SCTRP47872 440 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 FNTAP49354 379 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 SSR4P51571 173 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 RBBP5Q15291 538 aaKnown RBP19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 HECTD2Q5U5R9 776 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 MBOAT1Q6ZNC8 495 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 ZNF295-AS1Q8N0V1 137 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 MYRIPQ8NFW9 859 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 PYCR2Q96C36 320 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 SIGLEC10Q96LC7 697 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 NPAS2Q99743 824 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 RHBGQ9H310 441 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 KCNJ16Q9NPI9 418 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 EDARQ9UNE0 448 aa19.68■□□□□ 0.74
SQSTM1-210ENST00000506042 TRBV11-1A0A0K0K1C0 115 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 PEX1O43933 1283 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 GUCA1CO95843 209 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 SERPINA6P08185 405 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 HNMTP50135 292 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 OLR1P78380 273 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 TGM3Q08188 693 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 SPNS3Q6ZMD2 512 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 FRA10AC1Q70Z53 315 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 CD163Q86VB7 1156 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 ARMC10Q8N2F6 343 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 KIF2BQ8N4N8 673 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 NAT8LQ8N9F0 302 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 UTP15Q8TED0 518 aaKnown RBP19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 SEC16BQ96JE7 1060 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 DMRTA2Q96SC8 542 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 EGFL8Q99944 293 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 NPLQ9BXD5 320 aaPredicted RBP19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 CAPS2Q9BXY5 557 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 ASIC3Q9UHC3 531 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 SH2B3Q9UQQ2 575 aa19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 YARS2Q9Y2Z4 477 aaKnown RBP19.67■□□□□ 0.74
SQSTM1-210ENST00000506042 A8MVJ9 347 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 SAT1P21673 171 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 KIR3DL1P43629 444 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 HSD17B7P56937 341 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 PLGLB1Q02325 96 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 CYP1B1Q16678 543 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 CES4AQ5XG92 561 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 TMPRSS11BQ86T26 416 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 CNTN4Q8IWV2 1026 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 CLYBLQ8N0X4 340 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 KRT78Q8N1N4 520 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 TMEM132CQ8N3T6 1108 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 RASGEF1CQ8N431 466 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 NKAPQ8N5F7 415 aaKnown RBP19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 C16orf52Q8NHV5 167 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 ANKRD7Q92527 254 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 NEIL2Q969S2 332 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 CERS2Q96G23 380 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 PRM3Q9NNZ6 103 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 HPF1Q9NWY4 346 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 VWA7Q9Y334 891 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 ASB1Q9Y576 335 aa19.66■□□□□ 0.74
SQSTM1-210ENST00000506042 PKDREJQ9NTG1 2253 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 A0A1B0GTH9 108 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 FAM47E-STBD1D6RA91 191 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 MAN1A2O60476 641 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 ITGA10O75578 1167 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 ZFAND5O76080 213 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 MYO1DO94832 1006 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 GNAZP19086 355 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 TFEBP19484 476 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 MAOAP21397 527 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 HNF4AP41235 474 aa19.65■□□□□ 0.74
SQSTM1-210ENST00000506042 RAB8AP61006 207 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms