RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 MCEMP1Q8IX19 187 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 ANKRD53Q8N9V6 530 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 RUNDC3BQ96NL0 473 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 SLC6A16Q9GZN6 736 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 RHBGQ9H310 441 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 PSAT1Q9Y617 370 aa23.15■■□□□ 1.3
HERC4-212ENST00000505760 CTAGE15A4D2H0 777 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 ASPDHA6ND91 283 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 NPIPA5E9PKD4 350 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 NEURL1O76050 574 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 SP1P08047 785 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 MAOAP21397 527 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 GRNP28799 593 aaKnown RBP23.14■■□□□ 1.29
HERC4-212ENST00000505760 MGAT5Q09328 741 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 FRG1Q14331 258 aaKnown RBP23.14■■□□□ 1.29
HERC4-212ENST00000505760 C3AR1Q16581 482 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 MAPKAPK3Q16644 382 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 SLC25A25Q6KCM7 469 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 BNC2Q6ZN30 1099 aaPredicted RBP23.14■■□□□ 1.29
HERC4-212ENST00000505760 PNPLA5Q7Z6Z6 429 aaPredicted RBP23.14■■□□□ 1.29
HERC4-212ENST00000505760 CTAGE6Q86UF2 777 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 ARMC2Q8NEN0 867 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 ANKRD7Q92527 254 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 FRMD6Q96NE9 622 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 PRDM9Q9NQV7 894 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 TINAGQ9UJW2 476 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 NPIPA1Q9UND3 350 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 GTF3C1Q12789 2109 aa23.14■■□□□ 1.29
HERC4-212ENST00000505760 FAM95CA0A1B0GW59 222 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 CDK2AP1O14519 115 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 SLC25A12O75746 678 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 SERPINA6P08185 405 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 HTR1EP28566 365 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 TPP2P29144 1249 aaPredicted RBP23.13■■□□□ 1.29
HERC4-212ENST00000505760 HNMTP50135 292 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 HYAL2Q12891 473 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 ZNF460Q14592 562 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 TOR1AIP1Q5JTV8 583 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 FRA10AC1Q70Z53 315 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 ZC3HC1Q86WB0 502 aaKnown RBP23.13■■□□□ 1.29
HERC4-212ENST00000505760 TRIM51Q9BSJ1 452 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 KLHL31Q9H511 634 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 CHST11Q9NPF2 352 aa23.13■■□□□ 1.29
HERC4-212ENST00000505760 TCRBV16S1A1N1A0A5B0 115 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 SAGE2PA6NJ88 616 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 CYB561P49447 251 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 CDKL1Q00532 357 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 ZNF468Q5VIY5 522 aaPredicted RBP23.12■■□□□ 1.29
HERC4-212ENST00000505760 XKRXQ6PP77 449 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 SPPL2CQ8IUH8 684 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 FBXO36Q8NEA4 188 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 VPS39Q96JC1 886 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 TRIM31Q9BZY9 425 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 CTNNAL1Q9UBT7 734 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 OARD1Q9Y530 152 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 PKDREJQ9NTG1 2253 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 DCHS2Q6V1P9 2916 aa23.12■■□□□ 1.29
HERC4-212ENST00000505760 A8MUA0 341 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 H2AFYO75367 372 aaKnown RBP23.11■■□□□ 1.29
HERC4-212ENST00000505760 SEC31AO94979 1220 aaKnown RBP23.11■■□□□ 1.29
HERC4-212ENST00000505760 SMIM10L1P0DMW3 83 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 GNAZP19086 355 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 SMSP52788 366 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 TAS2R39P59534 338 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 STXBP1P61764 594 aaKnown RBP23.11■■□□□ 1.29
HERC4-212ENST00000505760 PDIA2Q13087 525 aaKnown RBP23.11■■□□□ 1.29
HERC4-212ENST00000505760 ZNF630Q2M218 657 aaPredicted RBP23.11■■□□□ 1.29
HERC4-212ENST00000505760 ADAMTSL2Q86TH1 951 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 CREB3L4Q8TEY5 395 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 TMEM125Q96AQ2 219 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 SMIM10Q96HG1 83 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 FAR2Q96K12 515 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 DEFB126Q9BYW3 111 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 NECTIN3Q9NQS3 549 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 ZNF835Q9Y2P0 537 aa23.11■■□□□ 1.29
HERC4-212ENST00000505760 IGKV3D-11A0A0A0MRZ8 115 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 FCHO1O14526 889 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 ASNA1O43681 348 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 NME2P1O60361 137 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 WDR47O94967 919 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 ZNF24P17028 368 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 NME2P22392 152 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 MLF1P58340 268 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 TSNQ15631 228 aaKnown RBP23.1■■□□□ 1.29
HERC4-212ENST00000505760 CREG2Q8IUH2 290 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 CA13Q8N1Q1 262 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 GPAMQ9HCL2 828 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 NSMCE4AQ9NXX6 385 aa23.1■■□□□ 1.29
HERC4-212ENST00000505760 NCOA6Q14686 2063 aaPredicted RBP23.1■■□□□ 1.29
HERC4-212ENST00000505760 C4orf51C9J302 202 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 C1GALT1C1LP0DN25 315 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 ABOP16442 354 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 GDF5P43026 501 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 SLC12A2P55011 1212 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 BTN3A2P78410 334 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 ADORA2A-AS1P86434 159 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 FASTKD3Q14CZ7 662 aaKnown RBP23.09■■□□□ 1.29
HERC4-212ENST00000505760 Q6ZPB1 254 aaPredicted RBP23.09■■□□□ 1.29
HERC4-212ENST00000505760 SIAH3Q8IW03 269 aa23.09■■□□□ 1.29
HERC4-212ENST00000505760 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms