RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 PPP2CAP67775 309 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DCDP81605 110 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ARHGAP19Q14CB8 494 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 UAP1L1Q3KQV9 507 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM74A3Q4VXF1 159 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 KLHL12Q53G59 568 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM31Q5JXX7 168 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TTC23Q5W5X9 447 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PSRC1Q6PGN9 363 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 AHSA2Q719I0 299 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RPS27LQ71UM5 84 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 C16orf62Q7Z3J2 963 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PROSER1Q86XN7 944 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC34A3Q8N130 599 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF781Q8N8C0 355 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 POGLUT1Q8NBL1 392 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 BBS10Q8TAM1 723 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF296Q8WUU4 475 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 KLHL6Q8WZ60 621 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CPT1BQ92523 772 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TMBIM1Q969X1 311 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 BIRC7Q96CA5 298 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 C1GALT1C1Q96EU7 318 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SIPA1Q96FS4 1042 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MS4A4AQ96JQ5 239 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SERAC1Q96JX3 654 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 C7orf34Q96L11 122 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SENP8Q96LD8 212 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR137Q96N19 417 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DEFB118Q96PH6 123 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 DPYSL5Q9BPU6 564 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 TBL1YQ9BQ87 522 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 RTP3Q9BQQ7 232 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 C2orf88Q9BSF0 95 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 GATA5Q9BWX5 397 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 MIR1-1HGQ9H1L0 117 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ASB8Q9H765 288 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 SEMA3GQ9NS98 782 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 B3GNT2Q9NY97 397 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PTGFRNQ9P2B2 879 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 AJAP1Q9UKB5 411 aaPredicted RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 IKZF3Q9UKT9 509 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 PSMD13Q9UNM6 376 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CACNA1EQ15878 2313 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 F5P12259 2224 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 CACNA1DQ01668 2161 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 HELZP42694 1942 aaKnown RBP3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 ROBO3Q96MS0 1386 aa3.55□□□□□ -1.84
PCDH11X-208ENST00000504220 A0A0J9YYE9 177 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 H3BMM5 538 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ACKR2O00590 384 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR182O15218 404 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SSNA1O43805 119 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NOBOXO60393 691 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OR10H3O60404 316 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TPST2O60704 377 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PSMD10O75832 226 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC22A5O76082 557 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PDE9AO76083 593 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PGLSO95336 258 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MT-CYBP00156 380 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 AHSGP02765 367 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 F11P03951 625 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CHRNGP07510 517 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GNAO1P09471 354 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM157BP0CG42 384 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RRASP10301 218 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 JUPP14923 745 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TCF4P15884 667 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF8P17098 575 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CCR9P51686 369 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PRKG2Q13237 762 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 BTN1A1Q13410 526 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GPR68Q15743 365 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC39A12Q504Y0 691 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SPANXN3Q5MJ09 141 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 AGAP6Q5VW22 663 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TXNRD3NBQ6F5E7 133 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DENND5AQ6IQ26 1287 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 METTL7BQ6UX53 244 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB11FIP2Q7L804 512 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC16A13Q7RTY0 426 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TRAPPC5Q8IUR0 188 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TRIM48Q8IWZ4 208 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 YAF2Q8IY57 180 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TCAIMQ8N3R3 496 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SVOPQ8N4V2 548 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB42Q8N4Z0 105 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 L3MBTL4Q8NA19 623 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OR56B2PQ8NGI1 322 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM110BQ8TC76 370 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MZB1Q8WU39 189 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 POF1BQ8WVV4 589 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ADAMTS14Q8WXS8 1223 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ING5Q8WYH8 240 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PROX1Q92786 737 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM159Q96B96 161 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SIGLEC10Q96LC7 697 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GLT1D1Q96MS3 346 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NECTIN4Q96NY8 510 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms