RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RGNQ15493 299 aa20.39■□□□□ 0.85
UBE2D3-216ENST00000503742 UBE3DQ7Z6J8 389 aa20.39■□□□□ 0.85
UBE2D3-216ENST00000503742 PLD3Q8IV08 490 aa20.39■□□□□ 0.85
UBE2D3-216ENST00000503742 TMBIM1Q969X1 311 aa20.39■□□□□ 0.85
UBE2D3-216ENST00000503742 TM4SF18Q96CE8 201 aa20.39■□□□□ 0.85
UBE2D3-216ENST00000503742 SLC6A20Q9NP91 592 aa20.39■□□□□ 0.85
UBE2D3-216ENST00000503742 SLC2A4RGQ9NR83 387 aa20.39■□□□□ 0.85
UBE2D3-216ENST00000503742 NDUFS4O43181 175 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 KDM1AO60341 852 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 TBX19O60806 448 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 LINGO3P0C6S8 592 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 MVDP53602 400 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 C16orf72Q14CZ0 275 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 LRIT3Q3SXY7 679 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 TBPL2Q6SJ96 375 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 RD3Q7Z3Z2 195 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 ADCK2Q7Z695 626 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 ST13P4Q8IZP2 240 aaPredicted RBP20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 MMP21Q8N119 569 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 CLEC4FQ8N1N0 589 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 FAM47BQ8NA70 645 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 TTLQ8NG68 377 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 OR2L3Q8NG85 312 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 CCL4L1Q8NHW4 92 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 QRFPRQ96P65 431 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 DPH2Q9BQC3 489 aaPredicted RBP20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 TRIM4Q9C037 500 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 SLC6A16Q9GZN6 736 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 TMEM168Q9H0V1 697 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 ZNF696Q9H7X3 374 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 UBE2ZQ9H832 354 aaPredicted RBP20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 TMEM184CQ9NVA4 438 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 SPHK1Q9NYA1 384 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 TAAR2Q9P1P5 351 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 ZNF624Q9P2J8 865 aaPredicted RBP20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 ADAM29Q9UKF5 820 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 SAMD4AQ9UPU9 718 aaKnown RBP20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 LRP4O75096 1905 aa20.38■□□□□ 0.85
UBE2D3-216ENST00000503742 A6NCN8 305 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 DDCP20711 480 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 NDUFS1P28331 727 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 RPS9P46781 194 aaKnown RBP20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 MAPK12P53778 367 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 TMEM214Q6NUQ4 689 aaKnown RBP20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 Q6ZS52 159 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 FAM20CQ8IXL6 584 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 RGMAQ96B86 450 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 ADI1Q9BV57 179 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 SARGQ9BW04 601 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 AICDAQ9GZX7 198 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 GPATCH2Q9NW75 528 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 NDRG2Q9UN36 371 aaKnown RBP20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 SNRNP200O75643 2136 aaKnown RBP20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 PLOD2O00469 737 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 TNFAIP8O95379 198 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 CST1P01037 141 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 SMIM18P0DKX4 95 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 SRFP11831 508 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 KDELR2P33947 212 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 MAGEA2P43356 314 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 SRP54P61011 504 aaKnown RBP20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 MERTKQ12866 999 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 ZIC1Q15915 447 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 NUDT13Q86X67 352 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 FBXL6Q8N531 539 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 MIEF1Q9NQG6 463 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 OR6C2Q9NZP2 312 aa20.37■□□□□ 0.85
UBE2D3-216ENST00000503742 IGHV4-34P06331 123 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 NUDT7P0C024 238 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 SHMT2P34897 504 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 BCL6P41182 706 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 GSTM5P46439 218 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 ALG11Q2TAA5 492 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 SLC36A3Q495N2 470 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 ZNF852Q6ZMS4 543 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.36■□□□□ 0.854e-11■□□□□ 10.1
UBE2D3-216ENST00000503742 FLCNQ8NFG4 579 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 C6orf106Q9H6K1 298 aaPredicted RBP20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 DDX31Q9H8H2 851 aaKnown RBP20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 POLMQ9NP87 494 aaPredicted RBP20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 TRNAU1APQ9NX07 287 aaKnown RBP20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 SMPD3Q9NY59 655 aaPredicted RBP20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 TAS2R9Q9NYW1 312 aa20.36■□□□□ 0.85
UBE2D3-216ENST00000503742 A0A1W2PRB8 838 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 LRIT2A6NDA9 550 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 TOR1BO14657 336 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 NTRK1P04629 796 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 CALRP27797 417 aaKnown RBP20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 ACTR1BP42025 376 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 ACTR1AP61163 376 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 LRRC23Q53EV4 343 aaPredicted RBP20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 Q6ZSR6 202 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 ABI3BPQ7Z7G0 1075 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 AMIGO1Q86WK6 493 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 NAGSQ8N159 534 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 ZCCHC7Q8N3Z6 543 aaKnown RBP20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 TRIML2Q8N7C3 387 aa20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 MAGEE2Q8TD90 523 aaPredicted RBP20.35■□□□□ 0.85
UBE2D3-216ENST00000503742 SLC35A5Q9BS91 424 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms