RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 IL11RAQ14626 422 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 SPIN4Q56A73 249 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 OR4C11Q6IEV9 310 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 ABHD13Q7L211 337 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 ADAMTS14Q8WXS8 1223 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 SMIM10Q96HG1 83 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 KCNC2Q96PR1 638 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 ZNF717Q9BY31 904 aaPredicted RBP19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 LHX9Q9NQ69 397 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 PRDM7Q9NQW5 492 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 DLL3Q9NYJ7 618 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 SLC22A7Q9Y694 548 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 NDUFAB1O14561 156 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 POLR1CO15160 346 aaPredicted RBP19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 B3GALT4O96024 378 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 RPL38P63173 70 aaKnown RBP19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 TARDBPQ13148 414 aaKnown RBP eCLIP19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 FAM214AQ32MH5 1076 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 GKAP1Q5VSY0 366 aaPredicted RBP19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 COMMD6Q7Z4G1 85 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 BPHLQ86WA6 291 aaPredicted RBP19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 PPP1R3BQ86XI6 285 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 CACTIN-AS1Q8N1I8 211 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 OR8K5Q8NH50 307 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 CTRCQ99895 268 aa19.39■□□□□ 0.69
CDC42SE2-206ENST00000503291 B4E171 279 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 E9PBE3 544 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 ZNF749O43361 778 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 KLHL41O60662 606 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 MED26O95402 600 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 ALOX12P18054 663 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 ITIH1P19827 911 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 BSGP35613 385 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 TSPAN7P41732 249 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 ARFIP1P53367 373 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 EMP3P54852 163 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 EMX2Q04743 252 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 TGM3Q08188 693 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 NDUFA9Q16795 377 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 DEFB134Q4QY38 66 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 GARNL3Q5VVW2 1013 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 TMEM198Q66K66 360 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 OGFOD2Q6N063 350 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 CYB5D1Q6P9G0 228 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 TTC29Q8NA56 475 aaPredicted RBP19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 C10orf90Q96M02 699 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 TEFMQ96QE5 360 aaKnown RBP19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 TBCDQ9BTW9 1192 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 C1orf50Q9BV19 199 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 POLR3HQ9Y535 204 aaPredicted RBP19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 SCN3AQ9NY46 2000 aa19.38■□□□□ 0.69
CDC42SE2-206ENST00000503291 CCDC187A0A096LP49 1063 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 FAM149AA5PLN7 773 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 GBAP04062 536 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 KLK1P06870 262 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 FGF5P12034 268 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 ERVK-8P63133 956 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 RAE1P78406 368 aaKnown RBP19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 BTN3A2P78410 334 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 MUM1Q2TAK8 710 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 SMU1Q2TAY7 513 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 PWWP2BQ6NUJ5 590 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 NOXRED1Q6NXP6 359 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 GALNT18Q6P9A2 607 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 AMER3Q8N944 861 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 FAM122AQ96E09 287 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 NDC1Q9BTX1 674 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 SIRT5Q9NXA8 310 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 SLC39A1Q9NY26 324 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 TMED5Q9Y3A6 229 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 PIEZO1Q92508 2521 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 EEDO75530 441 aaKnown RBP19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 TIAF1O95411 115 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 IL1RNP18510 177 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 SSR2P43308 183 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 EIF3IQ13347 325 aaKnown RBP19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 FAM53BQ14153 422 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 HERC3Q15034 1050 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 ZNF793Q6ZN11 406 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 PRSS41Q7RTY9 318 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 DDX31Q9H8H2 851 aaKnown RBP19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 CUTCQ9NTM9 273 aa19.37■□□□□ 0.69
CDC42SE2-206ENST00000503291 A0A1W2PNU3 283 aaPredicted RBP19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 PMS2P1A4D2B8 440 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 ALDOCP09972 364 aaKnown RBP19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 JMJD7P0C870 316 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 HIST1H1TP22492 207 aaPredicted RBP19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 ETV5P41161 510 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 TSFMP43897 325 aaKnown RBP19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 GCGRP47871 477 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 DIO3P55073 304 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 MAD2L1Q13257 205 aaPredicted RBP19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 IL23RQ5VWK5 629 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 PAGE2Q7Z2X7 111 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 SPATA19Q7Z5L4 167 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 NUDT13Q86X67 352 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 PDSS2Q86YH6 399 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 MARCH9Q86YJ5 346 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 TMEM126BQ8IUX1 230 aa19.36■□□□□ 0.69
CDC42SE2-206ENST00000503291 DTWD1Q8N5C7 304 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms