RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 C12orf42Q96LP6 360 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 PRRG4Q9BZD6 226 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 TLE6Q9H808 572 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 Q9H8V8 135 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 CHST11Q9NPF2 352 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 BARHL2Q9NY43 387 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 OR6C2Q9NZP2 312 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 KLHL8Q9P2G9 620 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-203ENST00000503274 CCL27Q9Y4X3 112 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 CUL9Q8IWT3 2517 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ZNF532Q9HCE3 1301 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 LAMA3Q16787 3333 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 PHIPQ8WWQ0 1821 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 A0A1W2PPK0 400 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 SLC15A5A6NIM6 579 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 EPHB6O15197 1021 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 DARSP14868 501 aaKnown RBP5.03□□□□□ -1.6
NIPBL-203ENST00000503274 EPCAMP16422 314 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ERCC2P18074 760 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 AZGP1P25311 298 aaKnown RBP5.03□□□□□ -1.6
NIPBL-203ENST00000503274 COG2Q14746 738 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 TCTE1Q5JU00 501 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 TMEM207Q6UWW9 146 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 CHST3Q7LGC8 479 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 GPR142Q7Z601 462 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 TLK2Q86UE8 772 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 LACC1Q8IV20 430 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 DCLK2Q8N568 766 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 OR2T6Q8NHC8 308 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 SPSB1Q96BD6 273 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ZNF653Q96CK0 615 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 CNDP2Q96KP4 475 aaKnown RBP5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ZNF558Q96NG5 402 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 RIOK1Q9BRS2 568 aaKnown RBP5.03□□□□□ -1.6
NIPBL-203ENST00000503274 LRRCC1Q9C099 1032 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 MTMR12Q9C0I1 747 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ZMYND12Q9H0C1 365 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 FAM49AQ9H0Q0 323 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-203ENST00000503274 BOLA2Q9H3K6 86 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 C11orf49Q9H6J7 331 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ERVMER34-1Q9H9K5 563 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 CCDC177Q9NQR7 707 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ZDHHC18Q9NUE0 388 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 EPHA6Q9UF33 1036 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 WDR37Q9Y2I8 494 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 MYH1P12882 1939 aa5.03□□□□□ -1.6
NIPBL-203ENST00000503274 ZSWIM8A7E2V4 1837 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 ATAD5Q96QE3 1844 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 MAST2Q6P0Q8 1798 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 AP5Z1O43299 807 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 ARHGEF9O43307 516 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 ZFAND5O76080 213 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 ZFYP08048 801 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-203ENST00000503274 ZNF883P0CG24 379 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 VAMP7P51809 220 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 HILS1P60008 231 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 IRX1P78414 480 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-203ENST00000503274 GABPAQ06546 454 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 NPTX1Q15818 432 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 SGSM1Q2NKQ1 1148 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 ACER1Q8TDN7 264 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 MRPS27Q92552 414 aaKnown RBP5.02□□□□□ -1.61
NIPBL-203ENST00000503274 VPS33AQ96AX1 596 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 ERP27Q96DN0 273 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 OPRPNQ99935 248 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-203ENST00000503274 SLC2A11Q9BYW1 496 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 GFRA4Q9GZZ7 299 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 OR10A4Q9H209 315 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 PORCNQ9H237 461 aa5.02□□□□□ -1.61
NIPBL-203ENST00000503274 RPAP3Q9H6T3 665 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-203ENST00000503274 NFKBIL1Q9UBC1 381 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-203ENST00000503274 C19orf25Q9UFG5 118 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-203ENST00000503274 LOC285556D6RIA3 1793 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 CASTOR2A6NHX0 329 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 O00370 1275 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 WDR46O15213 610 aaKnown RBP5.01□□□□□ -1.61
NIPBL-203ENST00000503274 EXTL3O43909 919 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 FLOT1O75955 427 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 SLC25A27O95847 323 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 CCDC175P0C221 793 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 GP1BBP13224 206 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 COPB2P35606 906 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 SLC6A12P48065 614 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 C12orf60Q5U649 245 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 OR4A47Q6IF82 309 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 UGT3A1Q6NUS8 523 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 PTAR1Q7Z6K3 402 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-203ENST00000503274 HOGA1Q86XE5 327 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 RYBPQ8N488 228 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-203ENST00000503274 CAMKVQ8NCB2 501 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 OR10G8Q8NGN5 311 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 OR10Q1Q8NGQ4 319 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 VANGL1Q8TAA9 524 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-203ENST00000503274 SDR42E1Q8WUS8 393 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 C10orf90Q96M02 699 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 CCDC3Q9BQI4 270 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 NAA11Q9BSU3 229 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-203ENST00000503274 SLC25A23Q9BV35 468 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 CLEC7AQ9BXN2 247 aa5.01□□□□□ -1.61
NIPBL-203ENST00000503274 NACAP1Q9BZK3 213 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms