RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	KCNE1B	A0A087WTH5	132 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	VSTM2B	A6NLU5	285 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	PCDH17	O14917	1159 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	FOXS1	O43638	330 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CCNT2	O60583	730 aa	Known RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CDC123	O75794	336 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	FAM155B	O75949	473 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	KLHL18	O94889	574 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ACSL3	O95573	720 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ONECUT2	O95948	504 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	INHBA	P08476	426 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ZNF888	P0CJ79	500 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	JAK1	P23458	1154 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CRABP2	P29373	138 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	HPD	P32754	393 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	SLC26A3	P40879	764 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	HNF4A	P41235	474 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	RAC1	P63000	192 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	REEP5	Q00765	189 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	PLAUR	Q03405	335 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CDC16	Q13042	620 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	BMPR2	Q13873	1038 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	TRADD	Q15628	312 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	SLC6A19	Q695T7	634 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	KIRREL2	Q6UWL6	708 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	PRSS41	Q7RTY9	318 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CMC1	Q7Z7K0	106 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ZC3H7A	Q8IWR0	971 aa	Known RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	KBTBD2	Q8IY47	623 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	IQCK	Q8N0W5	287 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CEP112	Q8N8E3	955 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	KCT2	Q8NC54	265 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	TRPV3	Q8NET8	790 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ABHD11	Q8NFV4	315 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	OR51Q1	Q8NH59	317 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	PNPLA2	Q96AD5	504 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	FAR2	Q96K12	515 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	OR4K3	Q96R72	315 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CYTH2	Q99418	400 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	SMAD5	Q99717	465 aa	Known RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CAPS2	Q9BXY5	557 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ALG9	Q9H6U8	611 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	SYNPO2L	Q9H987	977 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	COPS7B	Q9H9Q2	264 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	NMRAL1	Q9HBL8	299 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	LRRC4C	Q9HCJ2	640 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	DNAJC11	Q9NVH1	559 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ZFP69B	Q9UJL9	534 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	PLAA	Q9Y263	795 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	MRPS2	Q9Y399	296 aa	Known RBP	10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	ANGPTL3	Q9Y5C1	460 aa		10.09	□□□□□ -0.79
CDK11A-222	ENST00000498810	CPAMD8	Q8IZJ3	1885 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	IGLV3-12	A0A075B6K2	115 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810		A0A087X1B8	175 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810		A0A088AWK7	358 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	DYTN	A2CJ06	578 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	ANKDD1B	A6NHY2	528 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	SYCE1L	A8MT33	242 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	LCMT2	O60294	686 aa	Known RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	LTA4H	P09960	611 aa	Known RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	CD1D	P15813	335 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	ALOX12	P18054	663 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	TFEB	P19484	476 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	ZNF10	P21506	573 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	AHR	P35869	848 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	ARL1	P40616	181 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	HSPA7	P48741	367 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	SERPINB8	P50452	374 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	STXBP1	P61764	594 aa	Known RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	ACTN3	Q08043	901 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	PWP1	Q13610	501 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	SLBP	Q14493	270 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	IGFBP7	Q16270	282 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	PDK4	Q16654	411 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	FAM83E	Q2M2I3	478 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	DEFB134	Q4QY38	66 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	GLE1	Q53GS7	698 aa	Known RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	TOR1AIP1	Q5JTV8	583 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	MROH9	Q5TGP6	573 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	SULT1C3	Q6IMI6	304 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	NXPE4	Q6UWF7	544 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	LINC00696	Q6ZRV3	163 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	CYS1	Q717R9	158 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	NDUFAF7	Q7L592	441 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	MYLK4	Q86YV6	388 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	TMEM151B	Q8IW70	566 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	MMGT1	Q8N4V1	131 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	ZNF740	Q8NDX6	193 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	TTL	Q8NG68	377 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	STAG3L4	Q8TBR4	150 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	RHBDF1	Q96CC6	855 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	PEX11G	Q96HA9	241 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	WDR77	Q9BQA1	342 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	TGIF2	Q9GZN2	237 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	RHBG	Q9H310	441 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	MLXIPL	Q9NP71	852 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	NUDT4	Q9NZJ9	180 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	B3GNT3	Q9Y2A9	372 aa		10.08	□□□□□ -0.8
CDK11A-222	ENST00000498810	HELZ2	Q9BYK8	2649 aa	Known RBP	10.08	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms