RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 IGSF21Q96ID5 467 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 C16orf70Q9BSU1 422 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-207ENST00000494090 J3QRK9 145 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 SLC16A5O15375 505 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 RASAL1O95294 804 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 ITGB1P05556 798 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 CD47Q08722 323 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 SCAPQ12770 1279 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 LY6G5CQ5SRR4 150 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 MARVELD2Q8N4S9 558 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 FBXL8Q96CD0 374 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 C6orf47O95873 294 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 GDI2P50395 445 aaKnown RBP18.5■□□□□ 0.55
COL27A1-207ENST00000494090 UNC50Q53HI1 259 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 MLIPQ5VWP3 458 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 HACD2Q6Y1H2 254 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 OR10Q1Q8NGQ4 319 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 TMEM203Q969S6 136 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 B4GALT6Q9UBX8 382 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 PCDHB3Q9Y5E6 796 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 A0A096LPI6 279 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 S1PR4O95977 384 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 EDNRAP25101 427 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 CHCHD4Q8N4Q1 142 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 SLC7A6OSQ96CW6 309 aaPredicted RBP18.5■□□□□ 0.55
COL27A1-207ENST00000494090 OR51B5Q9H339 312 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 ELAC1Q9H777 363 aaKnown RBP18.5■□□□□ 0.55
COL27A1-207ENST00000494090 METTL7AQ9H8H3 244 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 ADAMTS6Q9UKP5 1117 aa18.5■□□□□ 0.55
COL27A1-207ENST00000494090 OR5K4A6NMS3 321 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 HPRP00739 348 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 TMBIM6P55061 237 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 TAS2R43P59537 309 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF763Q0D2J5 394 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 TICAM1Q8IUC6 712 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 MAPK15Q8TD08 544 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 TMEM125Q96AQ2 219 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 ISOC1Q96CN7 298 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 STRA6Q9BX79 667 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 KCNK6Q9Y257 313 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 A0A1W2PPW3 197 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 FAM221BA6H8Z2 402 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 LSM1O15116 133 aaKnown RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 SLC6A6P31641 620 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 ELOCQ15369 112 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 SLC22A16Q86VW1 577 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 GTPBP2Q9BX10 602 aaKnown RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF717Q9BY31 904 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 ADAMTS10Q9H324 1103 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 MAFFQ9ULX9 164 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 MGAT4BQ9UQ53 548 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 PSMD9O00233 223 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 GSRP00390 522 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 CSTBP04080 98 aaKnown RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 LIPJQ5W064 366 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 POF1BQ8WVV4 589 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 KIAA1143Q96AT1 154 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 RAD9AQ99638 391 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 LIN28AQ9H9Z2 209 aaKnown RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 MED11Q9P086 117 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 PRODH2Q9UF12 536 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 GLDCP23378 1020 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 MAPK3P27361 379 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 PITX1P78337 314 aaPredicted RBP18.49■□□□□ 0.55
COL27A1-207ENST00000494090 CLDN10P78369 228 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 REEP3Q6NUK4 255 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 HSPBAP1Q96EW2 488 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 TUBA1CQ9BQE3 449 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 OARD1Q9Y530 152 aa18.49■□□□□ 0.55
COL27A1-207ENST00000494090 MUSKO15146 869 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 TLX2O43763 284 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 BEST1O76090 585 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 SOX30O94993 753 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 NOVP48745 357 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF41P51814 821 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 GRIK2Q13002 908 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 NLGN3Q9NZ94 848 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 PCDHGB6Q9Y5F9 930 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 PLOD2O00469 737 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 MAFKO60675 156 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 GRB7Q14451 532 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF627Q7L945 461 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 MUS81Q96NY9 551 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 BAIAP2Q9UQB8 552 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 CAPN5O15484 640 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 DFNA5O60443 496 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 DNAJB5O75953 348 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF805Q5CZA5 627 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 ERN2Q76MJ5 926 aaKnown RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 MINDY1Q8N5J2 469 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 GOLM1Q8NBJ4 401 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 B3GNT4Q9C0J1 378 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 REEP4Q9H6H4 257 aa18.48■□□□□ 0.55
COL27A1-207ENST00000494090 EIF3KQ9UBQ5 218 aaKnown RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 SNNO75324 88 aaPredicted RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 EEDO75530 441 aaKnown RBP18.48■□□□□ 0.55
COL27A1-207ENST00000494090 ZNF234Q14588 700 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms