RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, human

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-222	ENST00000493919	MIPEP	Q99797	713 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	OMD	Q99983	421 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	OSBPL8	Q9BZF1	889 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	BIN3	Q9NQY0	253 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	DYRK4	Q9NR20	520 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	FBXL12	Q9NXK8	326 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	SMARCAL1	Q9NZC9	954 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	CD274	Q9NZQ7	290 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	USP36	Q9P275	1121 aa	Known RBP	11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	LHX3	Q9UBR4	397 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	SERGEF	Q9UGK8	458 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	GPR34	Q9UPC5	381 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	DHRS7	Q9Y394	339 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	NPFFR2	Q9Y5X5	522 aa		11.17	□□□□□ -0.62
BRCA1-222	ENST00000493919	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	ESYT3	A0FGR9	886 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	MFSD2B	A6NFX1	497 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	TTLL8	A6PVC2	850 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	NUDT19	A8MXV4	375 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	TOX3	O15405	576 aa	Predicted RBP	11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	GYG2	O15488	501 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	LEFTY1	O75610	366 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	CLPX	O76031	633 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	PRNP	P04156	253 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	CBR1	P16152	277 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	TGM2	P21980	687 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	CNTF	P26441	200 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	DCK	P27707	260 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	MSX1	P28360	303 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	CNR2	P34972	360 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	RGR	P47804	291 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	ALKBH1	Q13686	389 aa	Known RBP	11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	RPS6KA1	Q15418	735 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	OCLN	Q16625	522 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	TAZ	Q16635	292 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	KLHL26	Q53HC5	615 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	RIPPLY2	Q5TAB7	128 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	SEL1L2	Q5TEA6	688 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	DCAF12L1	Q5VU92	463 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	FAM46C	Q5VWP2	391 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	TIGD7	Q6NT04	549 aa	Predicted RBP	11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	SLC36A4	Q6YBV0	504 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	HDDC3	Q8N4P3	179 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	DEFB119	Q8N690	84 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	RBM15B	Q8NDT2	890 aa	Known RBP	11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	PHOX2B	Q99453	314 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	OR51B6	Q9H340	312 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	MLXIPL	Q9NP71	852 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	CTSF	Q9UBX1	484 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	CHKB	Q9Y259	395 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	KCNK7	Q9Y2U2	307 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	NEU2	Q9Y3R4	380 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	CORIN	Q9Y5Q5	1042 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	FKBP7	Q9Y680	259 aa		11.16	□□□□□ -0.62
BRCA1-222	ENST00000493919	KCNK1	O00180	336 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	EFS	O43281	561 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	VEGFD	O43915	354 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	SCAF4	O95104	1147 aa	Known RBP	11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	UGT2B4	P06133	528 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	GSN	P06396	782 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	GP1BA	P07359	652 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	NR2F1	P10589	423 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	C5AR1	P21730	350 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	ARNT	P27540	789 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	CRABP1	P29762	137 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	CD6	P30203	668 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	SLC7A1	P30825	629 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	NBL1	P41271	181 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	ANXA11	P50995	505 aa	Known RBP	11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	AQP4	P55087	323 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	MAX	P61244	160 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	DEFA6	Q01524	100 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	PDK1	Q15118	436 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	FAM182A	Q5T1J6	154 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	MEI1	Q5TIA1	1274 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	MARC1	Q5VT66	337 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	JMJD6	Q6NYC1	403 aa	Predicted RBP	11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	FBXL19	Q6PCT2	694 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	TTC33	Q6PID6	262 aa	Predicted RBP	11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	TFAP2E	Q6VUC0	442 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	CREB3L2	Q70SY1	520 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	SNX20	Q7Z614	316 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZDHHC13	Q8IUH4	622 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	GPALPP1	Q8IXQ4	340 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	OR8J2	Q8NGG1	315 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	NANP	Q8TBE9	248 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	ST7L	Q8TDW4	575 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	SNAPC3	Q92966	411 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	MAGEB18	Q96M61	343 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	ZNF599	Q96NL3	588 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	FCRL4	Q96PJ5	515 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	FAM118B	Q9BPY3	351 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	CEP41	Q9BYV8	373 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	BTBD1	Q9H0C5	482 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	RPF2	Q9H7B2	306 aa	Known RBP	11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	NT5M	Q9NPB1	228 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	ASH2L	Q9UBL3	628 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	PPM1H	Q9ULR3	514 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	SCML1	Q9UN30	329 aa		11.15	□□□□□ -0.62
BRCA1-222	ENST00000493919	NCKAP1	Q9Y2A7	1128 aa		11.15	□□□□□ -0.62

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