RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 S100ZQ8WXG8 99 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SMG7Q92540 1137 aaKnown RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 FKBP10Q96AY3 582 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF764Q96H86 408 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 NLNQ9BYT8 704 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZDHHC5Q9C0B5 715 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 RHBGQ9H310 441 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 OCEL1Q9H607 264 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF556Q9HAH1 456 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SPATA7Q9P0W8 599 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ERVK-11Q9UQG0 969 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 POFUT2Q9Y2G5 429 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 FAM32AQ9Y421 112 aaKnown RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF451Q9Y4E5 1061 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 NUP210Q8TEM1 1887 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 CACNB4O00305 520 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 MMP20O60882 483 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 MITFO75030 526 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 FAM20BO75063 409 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 CBFA2T3O75081 653 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 GABARAPO95166 117 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 TGFB1P01137 390 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 INHBBP09529 407 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 RRM2P31350 389 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 GRK3P35626 688 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 TAS2R50P59544 299 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 RPP38P78345 283 aaKnown RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 CDK6Q00534 326 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 HEPACAMQ14CZ8 416 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 IQCCQ4KMZ1 466 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 TMEM240Q5SV17 173 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 LRRTM4Q86VH4 590 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF366Q8N895 744 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 OR10Q1Q8NGQ4 319 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 CNIH3Q8TBE1 160 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 FAR1Q8WVX9 515 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 HERVK_113Q902F9 699 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 TFGQ92734 400 aaPredicted RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SMARCD2Q92925 531 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 MYDGFQ969H8 173 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 COX14Q96I36 57 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 SAMD11Q96NU1 681 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 FAM129BQ96TA1 746 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 PSD2Q9BQI7 771 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 DGCR6LQ9BY27 220 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 NAA50Q9GZZ1 169 aaKnown RBP9.25□□□□□ -0.93
NPHP3-209ENST00000493732 OR52A5Q9H2C5 316 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 TMEM245Q9H330 911 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 ANKHQ9HCJ1 492 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 NEUROD4Q9HD90 331 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 C1GALT1Q9NS00 363 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 PLCXD1Q9NUJ7 323 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 GALNT8Q9NY28 637 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 RAPGEFL1Q9UHV5 662 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 HCFC2Q9Y5Z7 792 aa9.25□□□□□ -0.93
NPHP3-209ENST00000493732 LINC01553A4QN01 128 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ARRDC5A6NEK1 342 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 PRRT4C9JH25 899 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 E9PQ18 207 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 M0R3G1 203 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 MPZL2O60487 215 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 BCAS1O75363 584 aaPredicted RBP9.24□□□□□ -0.93
NPHP3-209ENST00000493732 PDE9AO76083 593 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 C6orf47O95873 294 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 KLK1P06870 262 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ERGP11308 486 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 TEAD1P28347 426 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 MAGEA8P43361 318 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 GALK1P51570 392 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 MVDP53602 400 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 BNIP3Q12983 259 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 TMED1Q13445 227 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF234Q14588 700 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 DGUOKQ16854 277 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ANKRD34AQ69YU3 496 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 C16orf87Q6PH81 154 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 SLC9B2Q86UD5 537 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 C12orf40Q86WS4 652 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 FAM129CQ86XR2 697 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF547Q8IVP9 402 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 OR4K1Q8NGD4 311 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 RASSF5Q8WWW0 418 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 OR5P2Q8WZ92 322 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 SMPDL3AQ92484 453 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 FOXJ1Q92949 421 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 NXPE3Q969Y0 559 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 PLEKHA8Q96JA3 519 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ZNF300Q96RE9 604 aaPredicted RBP9.24□□□□□ -0.93
NPHP3-209ENST00000493732 WDR12Q9GZL7 423 aaKnown RBP9.24□□□□□ -0.93
NPHP3-209ENST00000493732 OR51B5Q9H339 312 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 HMG20AQ9NP66 347 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 NDUFAF4Q9P032 175 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 CXXC1Q9P0U4 656 aaPredicted RBP9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ADAM29Q9UKF5 820 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 ACSL5Q9ULC5 683 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 EXO1Q9UQ84 846 aaKnown RBP9.24□□□□□ -0.93
NPHP3-209ENST00000493732 COQ6Q9Y2Z9 468 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 PCDHGA10Q9Y5H3 936 aa9.24□□□□□ -0.93
NPHP3-209ENST00000493732 LYVE1Q9Y5Y7 322 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms