RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ZC3H3Q8IXZ2 948 aaKnown RBP19.46■□□□□ 0.71
RNF40-203ENST00000493683 RHBDF1Q96CC6 855 aa19.46■□□□□ 0.71
RNF40-203ENST00000493683 ZNF700Q9H0M5 742 aa19.46■□□□□ 0.71
RNF40-203ENST00000493683 CCM2LQ9NUG4 571 aaPredicted RBP19.46■□□□□ 0.71
RNF40-203ENST00000493683 CSN2P05814 226 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 GSCP56915 257 aaPredicted RBP19.45■□□□□ 0.7
RNF40-203ENST00000493683 GLT8D1Q68CQ7 371 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 SNX29P2Q8IUI4 249 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 CHERPQ8IWX8 916 aaKnown RBP19.45■□□□□ 0.7
RNF40-203ENST00000493683 ZNF350Q9GZX5 532 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 CD93Q9NPY3 652 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 A0A0G2JN53 185 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 INMT-MINDY4F8WBC2 141 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 PCDHGA12O60330 932 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 ACVRL1P37023 503 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 RPS13P62277 151 aaKnown RBP19.45■□□□□ 0.7
RNF40-203ENST00000493683 LRIF1Q5T3J3 769 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 CYS1Q717R9 158 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 TICAM1Q8IUC6 712 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 MARVELD2Q8N4S9 558 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 TMEM74Q96NL1 305 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 RANBP3Q9H6Z4 567 aaPredicted RBP19.45■□□□□ 0.7
RNF40-203ENST00000493683 MS4A12Q9NXJ0 267 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 RNF11Q9Y3C5 154 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 TEX13DA0A0J9YY54 714 aaPredicted RBP19.45■□□□□ 0.7
RNF40-203ENST00000493683 NOTOA8MTQ0 251 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 C9IYK1 514 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 M0R233 179 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 CLDN7O95471 211 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 GKN3PP0CG01 181 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 GJA9P57773 515 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 GABARAPL2P60520 117 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 PQLC3Q8N755 202 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 OR9I1Q8NGQ6 314 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 FCAMRQ8WWV6 532 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 OR5P2Q8WZ92 322 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 LPIN3Q9BQK8 851 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 CNOT11Q9UKZ1 510 aaKnown RBP19.45■□□□□ 0.7
RNF40-203ENST00000493683 RP2O75695 350 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 C6orf47O95873 294 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 TBX18O95935 607 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 S100A10P60903 97 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 HSDL2Q6YN16 418 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 ARMC5Q96C12 935 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 SLC2A11Q9BYW1 496 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 STYXL1Q9Y6J8 313 aa19.45■□□□□ 0.7
RNF40-203ENST00000493683 CCDC85CA6NKD9 419 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 E7EQ34 232 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 M0R036 132 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 MPC1LP0DKB6 136 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 CTSOP43234 321 aaPredicted RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 RABGGTBP53611 331 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 OGDHQ02218 1023 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 CHAF1BQ13112 559 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 IRF5Q13568 498 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 C22orf39Q6P5X5 142 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 ZNF675Q8TD23 568 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 THEM6Q8WUY1 208 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 BIRC8Q96P09 236 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 RBP7Q96R05 134 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 PIGBOS1A0A0B4J2F0 54 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 A0A1W2PPW3 197 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 PRKYO43930 277 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 MT-ND2P03891 347 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 ZNF776Q68DI1 518 aaPredicted RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 KCT2Q8NC54 265 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 SMPDL3BQ92485 455 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 HSPBAP1Q96EW2 488 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 NDRG2Q9UN36 371 aaKnown RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 WDR45Q9Y484 360 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 PCDHB14Q9Y5E9 798 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 A0A0J9YVX5 310 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 CTBP2P56545 445 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 INAVAQ3KP66 663 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 MS4A13Q5J8X5 152 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 LRRC66Q68CR7 880 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 ANKRD26P1Q6NSI1 321 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 PRSS58Q8IYP2 241 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 CCSER2Q9H7U1 834 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 LAMP5Q9UJQ1 280 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 A0A1W2PRU2 124 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 PLGP00747 810 aaPredicted RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 LEPRP48357 1165 aaKnown RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 SH3D19Q5HYK7 790 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 CMTR2Q8IYT2 770 aaKnown RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 OR4K17Q8NGC6 315 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 PMM1Q92871 262 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 MAGIXQ9H6Y5 334 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 C19orf25Q9UFG5 118 aaPredicted RBP19.44■□□□□ 0.7
RNF40-203ENST00000493683 HSPB11Q9Y547 144 aa19.44■□□□□ 0.7
RNF40-203ENST00000493683 UNCXA6NJT0 531 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 COQ5Q5HYK3 327 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 LRRC73Q5JTD7 316 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 OGFRL1Q5TC84 451 aaPredicted RBP19.43■□□□□ 0.7
RNF40-203ENST00000493683 NANOGP8Q6NSW7 305 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 FAM43BQ6ZT52 329 aaPredicted RBP19.43■□□□□ 0.7
RNF40-203ENST00000493683 RANBP9Q96S59 729 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 NANOGQ9H9S0 305 aa19.43■□□□□ 0.7
RNF40-203ENST00000493683 MEAF6Q9HAF1 191 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms