RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 ZNF888P0CJ79 500 aaPredicted RBP20.04■□□□□ 0.8
PFDN4-205ENST00000493356 MAOAP21397 527 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 SP140Q13342 867 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 NIPAL1Q6NVV3 410 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 ARHGAP11AQ6P4F7 1023 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 TMEM200AQ86VY9 491 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 CYP4Z2PQ8N1L4 340 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 ZNF559Q9BR84 538 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 HAUS8Q9BT25 410 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 KCNN3Q9UGI6 736 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 TRMT6Q9UJA5 497 aaKnown RBP20.04■□□□□ 0.8
PFDN4-205ENST00000493356 FBXO5Q9UKT4 447 aa20.04■□□□□ 0.8
PFDN4-205ENST00000493356 ACANP16112 2415 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 TRBC2A0A5B9 178 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 SDR42E2A6NKP2 422 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 USP27XA6NNY8 438 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 NADKO95544 446 aaPredicted RBP20.03■□□□□ 0.8
PFDN4-205ENST00000493356 SERPIND1P05546 499 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 DNAJA1P31689 397 aaKnown RBP20.03■□□□□ 0.8
PFDN4-205ENST00000493356 GPR85P60893 370 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 TIAL1Q01085 375 aaKnown RBP eCLIP20.03■□□□□ 0.8
PFDN4-205ENST00000493356 GPS1Q13098 491 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 PHKG1Q16816 387 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 EMC4Q5J8M3 183 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 MDGA2Q7Z553 956 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 STRA8Q7Z7C7 330 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 CCDC71Q8IV32 467 aaPredicted RBP20.03■□□□□ 0.8
PFDN4-205ENST00000493356 PALM2Q8IXS6 379 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 LMNTD2Q8IXW0 634 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 APCDD1LQ8NCL9 501 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 OR52N2Q8NGI0 321 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 NT5CQ8TCD5 201 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 MAIP1Q8WWC4 291 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 PYCR2Q96C36 320 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 NECTIN3Q9NQS3 549 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 PRDM9Q9NQV7 894 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 C20orf96Q9NUD7 363 aaPredicted RBP20.03■□□□□ 0.8
PFDN4-205ENST00000493356 AKAP6Q13023 2319 aa20.03■□□□□ 0.8
PFDN4-205ENST00000493356 A8MUA0 341 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 SLC16A5O15375 505 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 PDE9AO76083 593 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 HOXD4P09016 255 aaPredicted RBP20.02■□□□□ 0.8
PFDN4-205ENST00000493356 MLNP12872 115 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 RGS4P49798 205 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 NR0B1P51843 470 aaKnown RBP20.02■□□□□ 0.8
PFDN4-205ENST00000493356 RGS1Q08116 209 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 DHX9Q08211 1270 aaKnown RBP20.02■□□□□ 0.8
PFDN4-205ENST00000493356 ABHD13Q7L211 337 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 TMEM156Q8N614 296 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 CALML6Q8TD86 181 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 UTP15Q8TED0 518 aaKnown RBP20.02■□□□□ 0.8
PFDN4-205ENST00000493356 NRGNQ92686 78 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 SNF8Q96H20 258 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 SEC16BQ96JE7 1060 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 OR4K3Q96R72 315 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 NDNQ99608 321 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 TMUB1Q9BVT8 246 aa20.02■□□□□ 0.8
PFDN4-205ENST00000493356 PRRC2AP48634 2157 aaKnown RBP20.02■□□□□ 0.8
PFDN4-205ENST00000493356 TRBV11-1A0A0K0K1C0 115 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 ITGA10O75578 1167 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 RNH1P13489 461 aaKnown RBP20.01■□□□□ 0.79
PFDN4-205ENST00000493356 CLCN2P51788 898 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 PMPCAQ10713 525 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 CES4AQ5XG92 561 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 UGT3A1Q6NUS8 523 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 MYO1HQ8N1T3 1032 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 B3GNT7Q8NFL0 401 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 OR56A3Q8NH54 315 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 SERPINB12Q96P63 405 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 SPNS1Q9H2V7 528 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 CLK4Q9HAZ1 481 aaKnown RBP20.01■□□□□ 0.79
PFDN4-205ENST00000493356 XAB2Q9HCS7 855 aaKnown RBP20.01■□□□□ 0.79
PFDN4-205ENST00000493356 ZFATQ9P243 1243 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 ZFP69BQ9UJL9 534 aa20.01■□□□□ 0.79
PFDN4-205ENST00000493356 CTAGE15A4D2H0 777 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 GOLGA8MH3BSY2 632 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 HIST1H2AGP0C0S8 130 aaPredicted RBP20■□□□□ 0.79
PFDN4-205ENST00000493356 CD99P14209 185 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 HIST1H2ADP20671 130 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 SCTRP47872 440 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 IST1P53990 364 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 NUP107P57740 925 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 RAB8AP61006 207 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 HYAL2Q12891 473 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 HSP90AA5PQ58FG0 334 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 CATSPEREQ5SY80 951 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 DUPD1Q68J44 220 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 PAQR3Q6TCH7 311 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 KIAA0408Q6ZU52 694 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 CTAGE6Q86UF2 777 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 AGGF1Q8N302 714 aaeCLIP20■□□□□ 0.794e-8■□□□□ 9.4
PFDN4-205ENST00000493356 TBC1D19Q8N5T2 526 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 MCUQ8NE86 351 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 ARMC2Q8NEN0 867 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 HIST1H2AHQ96KK5 128 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 HIST1H2AJQ99878 128 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 H2AFJQ9BTM1 129 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 SLC6A16Q9GZN6 736 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 DEFB127Q9H1M4 99 aa20■□□□□ 0.79
PFDN4-205ENST00000493356 RHBGQ9H310 441 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms