RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 CCDC167Q9P0B6 97 aa20.98■□□□□ 0.95
PSPC1-204ENST00000492741 SDC1P18827 310 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 BSGP35613 385 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 BTN3A2P78410 334 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 PTGR1Q14914 329 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 PDCD4Q53EL6 469 aaKnown RBP20.97■□□□□ 0.95
PSPC1-204ENST00000492741 AGKQ53H12 422 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 GALNT18Q6P9A2 607 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 PAOXQ6QHF9 649 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 SLITRK4Q8IW52 837 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 FAM9CQ8IZT9 166 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 DEFB124Q8NES8 71 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 UTP15Q8TED0 518 aaKnown RBP20.97■□□□□ 0.95
PSPC1-204ENST00000492741 C11orf24Q96F05 449 aaPredicted RBP20.97■□□□□ 0.95
PSPC1-204ENST00000492741 FCRL1Q96LA6 429 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 DPY30Q9C005 99 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 SIRT5Q9NXA8 310 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 MCM8Q9UJA3 840 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 SERTAD3Q9UJW9 196 aa20.97■□□□□ 0.95
PSPC1-204ENST00000492741 A0A088AWK7 358 aa20.96■□□□□ 0.95
PSPC1-204ENST00000492741 EEDO75530 441 aaKnown RBP20.96■□□□□ 0.95
PSPC1-204ENST00000492741 SLC22A3O75751 556 aa20.96■□□□□ 0.95
PSPC1-204ENST00000492741 ZNF10P21506 573 aaPredicted RBP20.96■□□□□ 0.95
PSPC1-204ENST00000492741 GPX3P22352 226 aa20.96■□□□□ 0.95
PSPC1-204ENST00000492741 ADSLP30566 484 aaPredicted RBP20.96■□□□□ 0.95
PSPC1-204ENST00000492741 CSTF2P33240 577 aaKnown RBP eCLIP20.96■□□□□ 0.95
PSPC1-204ENST00000492741 TRA2AQ13595 282 aaKnown RBP eCLIP20.96■□□□□ 0.951e-6■■■□□ 17.1
PSPC1-204ENST00000492741 COL9A2Q14055 689 aaPredicted RBP20.96■□□□□ 0.95
PSPC1-204ENST00000492741 C6orf89Q6UWU4 347 aa20.96■□□□□ 0.95
PSPC1-204ENST00000492741 RBM44Q6ZP01 1051 aaKnown RBP20.96■□□□□ 0.95
PSPC1-204ENST00000492741 GPR135Q8IZ08 494 aa20.96■□□□□ 0.95
PSPC1-204ENST00000492741 TMEM74Q96NL1 305 aa20.96■□□□□ 0.95
PSPC1-204ENST00000492741 SPRTNQ9H040 489 aaPredicted RBP20.96■□□□□ 0.95
PSPC1-204ENST00000492741 FGF21Q9NSA1 209 aa20.96■□□□□ 0.95
PSPC1-204ENST00000492741 OR2B3O76000 313 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 B3GALT4O96024 378 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 TACR1P25103 407 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 PIK3R1P27986 724 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ARFIP1P53367 373 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 MAPK12P53778 367 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 UFM1P61960 85 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ACY1Q03154 408 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 FOXM1Q08050 763 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ZNF763Q0D2J5 394 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 NDUFA9Q16795 377 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 TMEM214Q6NUQ4 689 aaKnown RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 RIPOR1Q6ZS17 1223 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 B3GNT8Q7Z7M8 397 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 TTC29Q8NA56 475 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 OR9I1Q8NGQ6 314 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 OR8K5Q8NH50 307 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 TEFMQ96QE5 360 aaKnown RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 PRDM7Q9NQW5 492 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ZIM2Q9NZV7 527 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ADAM29Q9UKF5 820 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 C4orf51C9J302 202 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 SLC22A2O15244 555 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 LRATO95237 230 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 PCSK2P16519 638 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ALOX12P18054 663 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 HIST1H1TP22492 207 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 TPP2P29144 1249 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ASMTP46597 345 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ZFP36L1Q07352 338 aaKnown RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 GRM7Q14831 915 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 HERC3Q15034 1050 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ZSCAN26Q16670 478 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 PRTGQ2VWP7 1150 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 DEFB134Q4QY38 66 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 KIAA2013Q8IYS2 634 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 GFM2Q969S9 779 aaKnown RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 EGLN2Q96KS0 407 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ZBTB18Q99592 522 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ZNF717Q9BY31 904 aaPredicted RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 ROGDIQ9GZN7 287 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 DDX31Q9H8H2 851 aaKnown RBP20.95■□□□□ 0.94
PSPC1-204ENST00000492741 LHX9Q9NQ69 397 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 PCDHGA1Q9Y5H4 931 aa20.95■□□□□ 0.94
PSPC1-204ENST00000492741 UBOX5O94941 541 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 MSL3P1P0C860 447 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 ATP5A1P25705 553 aaKnown RBP20.94■□□□□ 0.94
PSPC1-204ENST00000492741 TSFMP43897 325 aaKnown RBP20.94■□□□□ 0.94
PSPC1-204ENST00000492741 LIMK1P53667 647 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 ITGA1P56199 1179 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 SLC9A5Q14940 896 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 ZNF793Q6ZN11 406 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 CCDC121Q6ZUS5 278 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 TREML1Q86YW5 311 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 TMEM132CQ8N3T6 1108 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 ACOT4Q8N9L9 421 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 C16orf78Q8WTQ4 265 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 SLC45A3Q96JT2 553 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 ZNF285Q96NJ3 590 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 ANKHQ9HCJ1 492 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 SLC22A7Q9Y694 548 aa20.94■□□□□ 0.94
PSPC1-204ENST00000492741 EP300Q09472 2414 aaPredicted RBP20.93■□□□□ 0.94
PSPC1-204ENST00000492741 LOC100653049A0A140TA62 436 aa20.93■□□□□ 0.94
PSPC1-204ENST00000492741 HYKKA2RU49 373 aa20.93■□□□□ 0.94
PSPC1-204ENST00000492741 CAPN14A8MX76 684 aa20.93■□□□□ 0.94
PSPC1-204ENST00000492741 AKAP10O43572 662 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms