RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 ADAMTSL2Q86TH1 951 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 SPATA6LQ8N4H0 392 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 KIF2BQ8N4N8 673 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 SLC5A8Q8N695 610 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 PYROXD1Q8WU10 500 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 MCMBPQ9BTE3 642 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 AICDAQ9GZX7 198 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 CAB39LQ9H9S4 337 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 SAYSD1Q9NPB0 183 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 SEC14L3Q9UDX4 400 aa16.2■□□□□ 0.18
SGMS1-204ENST00000492601 MTO1Q9Y2Z2 717 aaKnown RBP16.2■□□□□ 0.18
SGMS1-204ENST00000492601 TRGV8A0A0C4DH27 118 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 A0A0G2JN53 185 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 URADA6NGE7 173 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 GABRR3A8MPY1 467 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 A8MUA0 341 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 CXorf49A8MYA2 514 aaPredicted RBP16.19■□□□□ 0.18
SGMS1-204ENST00000492601 FAM227AF5H4B4 570 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 PSMD12O00232 456 aaPredicted RBP16.19■□□□□ 0.18
SGMS1-204ENST00000492601 SERPINA6P08185 405 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 RNH1P13489 461 aaKnown RBP16.19■□□□□ 0.18
SGMS1-204ENST00000492601 MAOAP21397 527 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 HNMTP50135 292 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 TAS2R50P59544 299 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 OC90Q02509 493 aaPredicted RBP16.19■□□□□ 0.18
SGMS1-204ENST00000492601 QSOX2Q6ZRP7 698 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.19■□□□□ 0.18
SGMS1-204ENST00000492601 BBOF1Q8ND07 529 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 MDS2Q8NDY4 140 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 CREB3L4Q8TEY5 395 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 CCT6BQ92526 530 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 ANP32BQ92688 251 aaKnown RBP16.19■□□□□ 0.18
SGMS1-204ENST00000492601 RHBDF1Q96CC6 855 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 CDCP1Q9H5V8 836 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 RNF14Q9UBS8 474 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 SH3BGRL2Q9UJC5 107 aa16.19■□□□□ 0.18
SGMS1-204ENST00000492601 NDC80O14777 642 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 PHGDHO43175 533 aaKnown RBP16.18■□□□□ 0.18
SGMS1-204ENST00000492601 H2AFYO75367 372 aaKnown RBP16.18■□□□□ 0.18
SGMS1-204ENST00000492601 SMIM10L1P0DMW3 83 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 C1GALT1C1LP0DN25 315 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 GNAZP19086 355 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 SLC6A12P48065 614 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 POU4F1Q01851 419 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 CALCOCO2Q13137 446 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 SLBPQ14493 270 aaKnown RBP eCLIP16.18■□□□□ 0.18
SGMS1-204ENST00000492601 FBXO48Q5FWF7 155 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 SLCO4C1Q6ZQN7 724 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 RPS19BP1Q86WX3 136 aaKnown RBP16.18■□□□□ 0.18
SGMS1-204ENST00000492601 LURAP1LQ8IV03 231 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 CA13Q8N1Q1 262 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 ELP5Q8TE02 316 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 RELTQ969Z4 430 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 SMIM10Q96HG1 83 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 PDLIM2Q96JY6 352 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 ERP44Q9BS26 406 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 DERL2Q9GZP9 239 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 TSPAN10Q9H1Z9 355 aaPredicted RBP16.18■□□□□ 0.18
SGMS1-204ENST00000492601 POPDC3Q9HBV1 291 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 TXNDC16Q9P2K2 825 aa16.18■□□□□ 0.18
SGMS1-204ENST00000492601 NCOA6Q14686 2063 aaPredicted RBP16.18■□□□□ 0.18
SGMS1-204ENST00000492601 RAD51CO43502 376 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 WISP3O95389 354 aaPredicted RBP16.17■□□□□ 0.18
SGMS1-204ENST00000492601 CCDC166P0CW27 439 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 CD46P15529 392 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 EEF1DP29692 281 aaKnown RBP16.17■□□□□ 0.18
SGMS1-204ENST00000492601 BTN3A2P78410 334 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 C2orf54Q08AI8 447 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 TGFBIQ15582 683 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 ZNF468Q5VIY5 522 aaPredicted RBP16.17■□□□□ 0.18
SGMS1-204ENST00000492601 TMIGD1Q6UXZ0 262 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 CDKL2Q92772 493 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 ESAMQ96AP7 390 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 TSPAN17Q96FV3 270 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 SCMH1Q96GD3 660 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 FAR2Q96K12 515 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 CLK4Q9HAZ1 481 aaKnown RBP16.17■□□□□ 0.18
SGMS1-204ENST00000492601 NECTIN3Q9NQS3 549 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 PRDM9Q9NQV7 894 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 WWOXQ9NZC7 414 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 WHRNQ9P202 907 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 PCDHGB6Q9Y5F9 930 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 DNAJC13O75165 2243 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 ZNF407Q9C0G0 2248 aa16.17■□□□□ 0.18
SGMS1-204ENST00000492601 TCRBV16S1A1N1A0A5B0 115 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 FAM187AA6NFU0 413 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 SAGE2PA6NJ88 616 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 CCL21O00585 134 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 TAPBPO15533 448 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 ERI3O43414 337 aaKnown RBP16.16■□□□□ 0.18
SGMS1-204ENST00000492601 HNRNPH1P31943 449 aaKnown RBP16.16■□□□□ 0.18
SGMS1-204ENST00000492601 STXBP1P61764 594 aaKnown RBP16.16■□□□□ 0.18
SGMS1-204ENST00000492601 CBLBQ13191 982 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 OR4D1Q15615 310 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 GALNTL5Q7Z4T8 443 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 GPSM1Q86YR5 675 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 KLHDC8AQ8IYD2 350 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 TMEM178AQ8NBL3 297 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 ARMC2Q8NEN0 867 aa16.16■□□□□ 0.18
SGMS1-204ENST00000492601 SPATA4Q8NEY3 305 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms