RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 NSG1A0A0A6YYJ2 146 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 FAM95CA0A1B0GW59 222 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ZNF839A8K0R7 811 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 FAM227AF5H4B4 570 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 EIF3FO00303 357 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 MAP2K7O14733 419 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 TAPBPO15533 448 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 OR1F1O43749 312 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 AGFG2O95081 481 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 WISP3O95389 354 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 LDLRP01130 860 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 SERPIND1P05546 499 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ANXA5P08758 320 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ACPPP15309 386 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 HNF4AP41235 474 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 PAFAH1B1P43034 410 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 KCNC1P48547 511 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 GPX6P59796 221 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 HYAL2Q12891 473 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 TSNQ15631 228 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 PPP1R3AQ16821 1122 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 UBAP2Q5T6F2 1119 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 AGAP7PQ5VUJ5 663 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 GARNL3Q5VVW2 1013 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 C1QL3Q5VWW1 255 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 DUPD1Q68J44 220 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 FCRLBQ6BAA4 426 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 CAPN13Q6MZZ7 669 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 FAM45BPQ6NSW5 357 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ISLR2Q6UXK2 745 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 KIAA0408Q6ZU52 694 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 SYDE1Q6ZW31 735 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ASPGQ86U10 573 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 THOC6Q86W42 341 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 C17orf64Q86WR6 236 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 TREML1Q86YW5 311 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 PALM2Q8IXS6 379 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ZBED8Q8IZ13 594 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ANKRD53Q8N9V6 530 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 SPATA4Q8NEY3 305 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 OR4K1Q8NGD4 311 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 OR1N1Q8NGS0 311 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 FAM45AQ8TCE6 357 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 GRHL3Q8TE85 626 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 TSLPQ969D9 159 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 NEIL2Q969S2 332 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 FBXL8Q96CD0 374 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 PEX11GQ96HA9 241 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 TSNARE1Q96NA8 513 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 AGAP4Q96P64 663 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 BARD1Q99728 777 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 NPAS2Q99743 824 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 NAT9Q9BTE0 207 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 TGIF2Q9GZN2 237 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 DRC3Q9H069 523 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ILKAPQ9H0C8 392 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ZNF700Q9H0M5 742 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 SAYSD1Q9NPB0 183 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 MKKSQ9NPJ1 570 aaPredicted RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ARL15Q9NXU5 204 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 NXT1Q9UKK6 140 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 G3BP2Q9UN86 482 aaKnown RBP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 SLC22A14Q9Y267 594 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 ADGRG4Q8IZF6 3080 aa6.9□□□□□ -1.3
PRPF4B-208ENST00000490653 SVILO95425 2214 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 HIVEP3Q5T1R4 2406 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 NF1P21359 2839 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 A0A0G2JN53 185 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 MYOCOSA0A1B0GUC4 107 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 NCF1BA6NI72 391 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 A8MUI8 341 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 NCF1CA8MVU1 366 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 H0YIG0 161 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 CCDC188H7C350 402 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 E2F3O00716 465 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 PHGDHO43175 533 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 ZNHIT1O43257 154 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 CHST10O43529 356 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 CDC123O75794 336 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 SEC24DO94855 1032 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 NSA2O95478 260 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 WDPCPO95876 746 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 SERPINA7P05543 415 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 HIST1H2AGP0C0S8 130 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 SMIM10L1P0DMW3 83 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 NCF1P14598 390 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 ZNF37AP17032 561 aaPredicted RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 HIST1H2ADP20671 130 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 XCR1P46094 333 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 AVPR1BP47901 424 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 CCR8P51685 355 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 RAB8AP61006 207 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 RPS15AP62244 130 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 BTG2P78543 158 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 SLC7A5Q01650 507 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 DLG1Q12959 904 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 MFAP5Q13361 173 aa6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 RBBP5Q15291 538 aaKnown RBP6.89□□□□□ -1.31
PRPF4B-208ENST00000490653 NDUFA9Q16795 377 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms